Helicobacter pylori Shi470: HPSH_03665
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Entry
HPSH_03665 CDS
T00742
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hps
Helicobacter pylori Shi470
Pathway
hps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPSH_03665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hps03019
]
HPSH_03665
Enzymes [BR:
hps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HPSH_03665
Messenger RNA biogenesis [BR:
hps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HPSH_03665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
IPK
Motif
Other DBs
NCBI-ProteinID:
ACD48168
LinkDB
All DBs
Position
complement(702902..704068)
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AA seq
388 aa
AA seq
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MFELDKELQELFDIYEKSSHELYLVGGCVRDCLMGITPKDYDLTSNALVNESKELLLKHH
FRVLETGIKHGTITALKNNQSYEITTFRIEKGHIKHRKPKELVFSARLTDDLKRRDFSMN
AIAYSPTKGVIDPFKGQNAIENQIIECVGGARLRFFEDALRILRALRFSAILGFKIAPST
KEAIFACKDLLKHLSKERLQSELNKFLMGKNAYEVAKEYQEILELVTQEKIENLGFLKNA
PFNLGLRLLGFFKHQKSLENLRYPKKTCVLFLKAKECHKDFLNIHNKTGLKFLLKNYDLE
PFNLALDFYALKNPKCALKIKSLLKEIFNANEPFKKEHLALKGGTLQNLGYRRQKIGEIL
NACLNLVIAHPENNSLERLVEWVRDRGY
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgagttagacaaagaattacaagaattgtttgacatttatgaaaaatcctctcat
gagctttacttggtaggggggtgcgtgcgcgattgtttgatgggaattacccctaaagac
tacgatttaacttcaaacgctttagtcaatgaaagtaaagaacttcttttaaaacaccat
tttagggtgctagaaaccggcatcaagcatggcacgatcacggctcttaaaaacaatcaa
agctatgaaatcacaacctttagaattgaaaaagggcatatcaagcaccgaaagcctaaa
gaattggtttttagcgctcgtttaacagacgatttaaagcggcgcgattttagcatgaat
gcgatcgcttatagccctacaaaaggggttattgatccttttaaggggcaaaatgcgatt
gaaaatcaaataattgaatgcgtggggggagcgcgattgaggttttttgaggacgcttta
aggattttaagagcgttgcgatttagcgcgattttaggctttaagatagcaccaagcact
aaagaagcgatttttgcgtgtaaggatttgttaaaacatctttctaaagagcgcttacaa
agtgaattgaataagtttcttatggggaaaaacgcctatgaagtggctaaagagtatcaa
gaaattttagagttggttactcaagagaaaatagaaaatttagggtttttaaaaaacgcg
cctttcaatctgggattaagattgttagggttttttaaacatcaaaaaagtttagaaaat
ttacgctaccctaaaaaaacttgtgttttatttttaaaagctaaagaatgccataaagat
tttttaaatattcataacaaaacaggattaaaatttttattgaaaaactacgatttagag
ccttttaatttggctttagatttttatgcgctcaaaaaccccaaatgcgctttaaaaatt
aaaagcttgttaaaagaaatattcaacgctaacgagccttttaagaaagaacacctagcc
cttaagggtgggacgcttcaaaacttgggctaccggcgccaaaaaatcggcgaaatcttg
aacgcatgcctaaatttagtcatcgctcaccctgaaaataattctttagaacgcttggtg
gagtgggtgagggataggggttattga
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