Helicobacter pylori Shi470: HPSH_04145
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Entry
HPSH_04145 CDS
T00742
Name
(GenBank) cag pathogenicity island protein (cagA, cag26)
KO
K15842
cytotoxicity-associated immunodominant antigen
Organism
hps
Helicobacter pylori Shi470
Pathway
hps05120
Epithelial cell signaling in Helicobacter pylori infection
Module
hps_M00564
Helicobacter pylori pathogenicity signature, cagA pathogenicity island
Brite
KEGG Orthology (KO) [BR:
hps00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05120 Epithelial cell signaling in Helicobacter pylori infection
HPSH_04145
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CagA_N
CagA
Motif
Other DBs
NCBI-ProteinID:
ACD48264
LinkDB
All DBs
Position
complement(804109..807594)
Genome browser
AA seq
1161 aa
AA seq
DB search
MANETINQTKNPDQTPNQTAFDPQQFINNLQVAFIKVDSAVASFDPDQKPIVDKNDRDNR
QAFNGISQLREEYANKAIKNPNKKNQYFSDFINKSNDLINKDNLIDTDSSTKSFQKFGPE
PYQIFMNWVSHQKDPSKINTQKIRDFMENIIQPPISDDKEKAEFLRSAKQSFAGIIIGNQ
TRSDEKFMGVFEESLKEKQEAEKKGEPSGDWLDIFLSFVFNKKQSSDLKETLNQEPRPNV
EQNIATTPTPIQGLPLEARDLLDERGDFSKFTLGDMEMLDVEGVADIDPNYKFNQLLIHN
NALSSMLMGSHGNIDLEKVSLLYGDNGGPEARHDWNATVGYKNQQGNNVATLINAHLKNG
SGLIIAGNENGINNPSFYLYKKDQLTGLEQALSQEEIQNKLGFMEFLAQNSARHVGLNNL
SKEEKEKFQTEIGNFQKDPKAYLDTLGSDHIAFVSKKDQKHLALVTEFGNGELSYTLKDY
GKKPDRALDRETKTTLQGNLKDDGVMFVNYSNFKYTNASKSPNEGIGATNGVSHLEANFS
KVAVFNLPDLNGLAVSSFARRNLEDKLAAKGLSGKESNKLIKDFLSSNKELLEKVLNFNK
AVAEAKNTGNYDGVKKAQKDLEKSIRKRERLEKEITKQFESKSGNKNKMEAKAQANSQKD
EIFKLINEGAYKEARIIAYAQNLKGIRRELSDRMGNINKNLKDFNQSFDALKSGKNKDFS
KVEETLKALKSSVKDLNINPEWISKVENLNVALNEFKNGKNKDFSKVTQAKSDLENSIKD
VHINQQITDKVDNLNQAVLVAKATGDFSRVEQALAGFKKFLTDQKNENFNVGKNSDLQSV
KNGVNGTLVGNGLSVTEATTLTKKFSDIKKELNEKFANFNKNSNGLKNSAEPIYAQVNKK
KTGQVASPEESIYTQVAKEVNEKINRLNEKASASKGVGNFSGAGRLDSPEPIYATIDDLG
GSSPLKRHAKVDDLSKVGLSREQELTQKIGNLNQAVSEAKAGSFGNLERTMDGLKDSTKK
NVVNLWFEGARKVPISLQAKLDNYATNSHTRINSNVKNGTINEKATIMLTQKNPEWLKLV
NDKIVAHNVGSTPLSDYDKIGFNQKNMKDYSDSFKFSIKLSNAVKNIKSGFVQCLTDCIS
AGSYSPKKAEHGVTKSGFQKS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgaaaccatcaatcaaacaaaaaatccagatcaaacaccaaaccaaacggct
tttgatccacaacaatttatcaataatcttcaagtggctttcattaaagttgatagcgct
gtcgcttcatttgatcccgatcaaaaaccaatcgttgataagaacgatagggataacagg
caagcttttaatggaatctcgcaattaagggaagaatacgccaataaagcgatcaaaaat
cccaacaaaaagaatcagtatttttcagactttatcaataagagcaatgatttgatcaac
aaagacaatctcattgatacagattcttccacaaagagctttcagaaatttgggcctgag
ccttaccaaatttttatgaattgggtgtcccatcaaaaagatccgtctaaaatcaacacc
caaaaaatccgagattttatggaaaatatcatacaaccccctatctctgatgataaagaa
aaagcggagtttttgaggtctgccaaacaatcttttgcaggaattatcataggaaaccaa
acccgatcggatgaaaaattcatgggcgtgtttgaagaatctttgaaagagaagcaagaa
gcagaaaaaaaaggagagcctagtggggattggcttgatatttttttatcgtttgtgttt
aacaaaaaacaatcttccgatctcaaagaaacgctcaatcaagagccaaggcctaatgtt
gaacaaaatatagccactacccccacccccatacaaggcttaccgcttgaagctagggat
ttgcttgatgaaaggggtgatttttctaaattcactcttggtgatatggaaatgttggat
gttgagggtgtcgccgacattgatcctaattacaagttcaaccagttattgattcacaat
aacgctctgtcttctatgctaatggggagtcatggcaacatagatcttgaaaaagtttca
ttgttgtatggggataatggtggccctgaagctaggcatgattggaacgccaccgttggt
tataaaaaccaacaaggcaacaatgtggccacactcatcaatgcacatcttaaaaacggc
agtgggttaatcatagcgggtaatgaaaatgggattaacaaccctagcttctatctctac
aaaaaagaccaactcacaggcttggaacaagcgttgagtcaagaagagatccaaaacaaa
ctaggtttcatggaatttcttgcacaaaacagcgctagacatgttggattaaataacttg
agcaaggaagagaaagaaaagttccaaactgaaattggaaatttccaaaaagaccctaag
gcttatttagacaccctagggagtgatcacattgcttttgtttctaaaaaagaccaaaag
catttagctttggttactgagtttggcaatggggaattgagctataccctcaaagattat
gggaaaaaaccagatagagctttagatagggagacaaaaaccactcttcaaggtaaccta
aaagatgatggcgtgatgtttgtcaattattccaatttcaaatacaccaacgcctccaag
agtcctaatgagggtataggcgctacgaatggcgtttcccatttggaagcaaattttagc
aaggtagctgtctttaatttgcctgatttaaatggtctcgctgtctctagttttgcaagg
cggaatttagaggataaactggccgctaaaggattgtccggaaaagaatctaataagctc
atcaaagactttttgagcagcaacaaggaattgcttgaaaaagttttaaacttcaataaa
gctgtagctgaagctaaaaatacaggcaattatgatggggtgaaaaaagctcaaaaagat
cttgaaaaatctataaggaaacgagagcgtttagagaaagaaataacgaaacaatttgag
agcaagagcggcaacaaaaataaaatggaagcaaaagctcaagctaacagccaaaaagat
gagatttttaagcttatcaatgaaggggcttataaggaagcaagaatcatcgcttacgct
cagaatcttaaaggcatcaggagggaattgtctgatagaatgggaaatatcaacaagaat
ttgaaagactttaatcaatcttttgatgcgctcaaaagtggtaaaaataaggatttcagc
aaggtagaagaaacgctaaaagcccttaaaagctcggtgaaagatttgaatatcaatcca
gaatggatttcaaaagttgaaaaccttaatgtagctttgaatgaattcaaaaatggcaaa
aataaggatttcagcaaggtaacacaagcaaaaagcgaccttgaaaattccattaaggat
gtgcacatcaatcaacagataacggataaagttgacaatctcaatcaggctgtattagtg
gctaaagcgacaggcgatttcagtagggtagagcaagcgctagccggattcaaaaaattc
ttaacggatcaaaaaaatgaaaatttcaatgttggaaaaaattctgatctacaatccgtt
aaaaatggtgtaaatggaaccctagtcggtaatggattatctgtaacagaagccacaacg
ctcaccaaaaaattttcggacattaagaaagaattgaatgagaaatttgcaaatttcaac
aaaaatagtaatggactcaaaaacagcgcagagcccatttacgctcaagttaataaaaag
aaaacaggacaagtagctagccctgaagagtccatttacactcaagttgctaaagaggta
aatgaaaaaattaaccgactcaacgaaaaagcatcagcaagtaaaggagtgggcaatttt
agtggagcagggcgattagatagccctgaacccatttacgctacgattgatgatctcggc
ggatcttcccctttgaaaaggcatgctaaagttgatgatctcagtaaggtagggctttca
agggagcaagaattgactcagaaaattggcaatctcaatcaggcagtgtcagaagctaaa
gcaggttcttttggcaacctagaacgaacgatggatggactcaaagattctacaaaaaag
aatgttgtgaatctatggtttgaaggtgcaagaaaagtgcctattagtttgcaagcgaaa
ttggacaattacgctactaacagccacacacgcattaatagcaatgtcaaaaatggaaca
atcaatgaaaaagcgaccatcatgctaacgcaaaaaaaccctgagtggctcaagctcgtg
aatgataagatagttgcgcataatgtgggaagcactcctttgtcagattatgataaaatt
ggattcaaccaaaagaatatgaaagattactctgattcgttcaagttttccatcaagttg
agtaatgccgtaaaaaacattaagtctggctttgtgcaatgtttaaccgattgcatttct
gcaggatcttacagcccaaagaaagcggaacatggagttacaaaaagtggtttccagaaa
tcttaa
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