Entry |
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Name |
(GenBank) rep helicase, single-stranded DNA-dependent ATPase
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KO |
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Organism |
hps Helicobacter pylori Shi470
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:hps00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPSH_04795
03430 Mismatch repair
HPSH_04795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:hps03400]
HPSH_04795
Enzymes [BR:hps01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPSH_04795
DNA repair and recombination proteins [BR:hps03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPSH_04795
MMR (mismatch excision repair)
Other MMR factors
HPSH_04795
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
944730..946760
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AA seq |
676 aa
MLETLQLNPEQLKAAKALKGYNLVIASAGTGKTSTIVGRILYLLDNGIKPEEILLLTFTN
KASNEMIARVAKYSKLSSKIEAGTFHAVAYRYLKEHYPNLSLKQPKELKKLLESIVDTKN
ALTDDDKKPYTSQHLYALYSLYTNALKQEDFSAWLSNKNPEHTPYAAFYENILDEFENTK
KKHNYIDYNDLLLLFKQAMLERPSPYKEVLCDEFQDTNPLQESILDAINPPSLFCVGDYD
QSIYAFNGADISIISNFTQKYKNAQVFTLTKNYRSSKEILDLANQVIQHNERIYPKNLEV
VKSGHFNKPALLNYNDNIAQCQDIAKRIVMRKDFKEVAVIFRNNASADQLEAALRSHNVP
SKRKGSASFFESKEVALALDICALIFNPKDIMAAIHVLSHISDIGSNTAKDIHEALMLLG
NGDLKLALTHPNKEAKIYTKKKEITSMGLFEEIFALENSSRFNSVIDKAFHSHPVLMHPK
ISLNGAKMLSDFFILYTKAPTHSPSALIKHILESVFFQTFKTRLLKERSKNKDGSYNEFK
KLQAQKRFNEKMDLLSSLAKNYQNLGRFLNGTLIGSSEATQGEGVNLLSVHASKGLEFKD
VYIIDLMEGRFPNHKLMNTGGGIEEERRLFYVAITRAKENLWLSYAKNELRENAKPKEHK
PSVFLYEAGLLKPDLK |
NT seq |
2031 nt +upstreamnt +downstreamnt
ttgttagaaactttgcaattaaaccctgagcaattaaaagcggccaaggctttgaaaggg
tataatttagtgattgcgagcgctggcacaggaaagacttctacgattgtggggcgcatt
ttatacctgcttgataacggcatcaagcctgaagaaatcttgcttttgactttcaccaat
aaagcgagtaatgaaatgatcgctagggtggctaaatattccaagttaagctccaaaatt
gaagcgggcactttccatgcggtggcgtatcgctatttaaaagagcattaccccaattta
agcctaaagcaacctaaagaattgaaaaaacttttagaaagcattgtggatactaaaaac
gcgctaacagatgacgataaaaagccctacacttcgcagcatctctacgccctctattct
ctttataccaacgctctaaaacaagaagattttagtgcatggctttctaataaaaaccct
gaacacacgccatacgccgccttttatgaaaacattttagacgaatttgaaaacactaaa
aaaaagcataattatattgactataacgacttactgctgttgtttaaacaagcgatgcta
gaaagacctagcccttataaagaagtgctttgcgatgagtttcaagacactaacccctta
caagaatccattttagacgctatcaaccctcccagtttgttttgcgtgggcgattacgat
cagagcatttacgcttttaatggggcggatatttctatcatttctaatttcactcaaaaa
tacaaaaacgcccaggttttcacgctcaccaaaaactaccgctcttctaaagagatttta
gatctcgctaatcaagtgatacaacacaacgagcgcatttaccctaaaaatttagaagtg
gtgaaatcagggcatttcaataagcccgcgcttttaaattacaacgacaatatcgcgcaa
tgccaagacatcgctaaacgcattgtcatgcgaaaggattttaaagaagtggcagtgatt
tttaggaataacgcgagcgcggatcaattagaagccgctttaagatcccacaatgtgcca
agcaaaagaaaagggagcgcaagcttctttgaatccaaagaagtggcgttagcgttagac
atttgcgcgctcatctttaaccctaaagacattatggcagcaatccatgttttaagccat
atcagcgatattggctctaacaccgctaaagacattcatgaggccttaatgcttttaggc
aatggcgatctcaaattagccctaacccaccctaataaagaagccaaaatttacaccaag
aaaaaagaaatcacctctatggggctttttgaagaaatttttgccctagaaaacagctca
aggtttaatagcgtgatagataaagcgtttcattcgcacccggtgttgatgcaccctaaa
atctcactcaatggggctaaaatgcttagcgattttttcattctttataccaaagcccct
acccattcccctagcgctttaatcaaacacatcctagaaagcgtgttttttcaaaccttt
aaaacacgccttttaaaagagcgatccaagaataaggacggctcttataacgaatttaaa
aaactccaagcgcaaaaacgcttcaatgaaaaaatggatttgctgagttctttggcgaaa
aattaccagaatttagggcgttttttaaacggcactttaataggctctagtgaagccacg
caaggcgagggcgtgaatttattgagcgtgcatgcttctaaaggcttggaatttaaagat
gtttatattatcgatttaatggagggccgtttccctaaccacaagctcatgaataccggt
gggggcattgaagaagagcggcggcttttttatgtcgctatcacaagggctaaggaaaat
ttatggctttcttatgcgaaaaacgaattgagagaaaacgccaaacctaaagagcataag
ccctcggtgtttttgtatgaagcggggcttttgaaacccgatttaaaataa |