Helicobacter pylori Shi470: HPSH_05410
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Entry
HPSH_05410 CDS
T00742
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
hps
Helicobacter pylori Shi470
Pathway
hps03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hps00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HPSH_05410 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hps03011
]
HPSH_05410 (rpsA)
Ribosome [BR:
hps03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HPSH_05410 (rpsA)
Bacteria
HPSH_05410 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
S1CSD-TOTE-1
CsrA
CBFD_NFYB_HMF
RuBisCo_chap_C
RuvA_N
Motif
Other DBs
NCBI-ProteinID:
ACD48493
LinkDB
All DBs
Position
1067619..1069277
Genome browser
AA seq
552 aa
AA seq
DB search
MSKIPDDQNFNDEEENFAELLKKEETLEKGTIKEGLIVSINENDGYAMVSVGGKTEGRLA
LSEITDEKGQLLYQKNDPIIVHVSEKGEHSSVSYKKAISQQKIQAKIEELGENYENAIIE
GKIVGKNKGGYIVESQGVEYFLSRSRSSLKNDANHIGKRIKACIIHVDKENHSINISRKR
FFEVNDKRQLEVSKELLEATEPVLGVVRQITPFGIFVEVKGVEGLVHYSEISHKGPVNPE
KYYKEGDEVCVKAIAYDEEKRRLSLSIKATIEDPWEEIQDKLKPGYAIKVVVSNIENYGA
FVDIGNDIEGFLHVSEISWDKNVSHPSNYLSVGQEIDVKIIDIDPKNRRLRVSLKQLTNR
PFDVFESKHQVGDVLEGKVATLTDFGAFLNLGGVDGLLHNHDAFWDKDKKCKDHYKIGDV
IKVKILKINKKDRKISLSAKHLVTSPTEEFAQKHKTDSVIQGKVVSIKDFGVFINADGID
VLIKNEDLNPLKKDEIKIGQEITCVVVAIEKSNNKVRASVHRLERKKEKEELQAFNTSDD
KMTLGDILKEKL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagataccagatgatcagaactttaatgacgaggaggaaaacttcgcagaactc
ttaaaaaaagaagaaaccctagaaaaaggcactatcaaagaagggctaatcgtttccatc
aatgagaatgatggctatgctatggtgagcgtgggcggtaagacagaaggtcgtttggct
ttgagtgagatcaccgatgaaaaggggcagttgctgtatcaaaaaaatgaccccattatc
gtgcatgtgtccgaaaaaggtgagcactctagcgtttcctacaaaaaggccatttcccaa
caaaagattcaagcgaaaattgaagaattaggcgaaaactatgaaaacgccattattgaa
ggcaagattgtaggcaagaataaagggggttatatcgtggagtctcaaggcgtggagtat
ttcctctcccgctcgcgctcttctttaaagaatgacgcaaaccatatcggcaaacgcatt
aaagcgtgcatcattcatgtggataaggaaaaccattctatcaatatttctcgcaaacga
ttctttgaagtcaatgacaaacgacagcttgaagtttctaaagaattgttagaagcgaca
gagccggtgttaggggttgtgcgccagatcaccccttttggtatttttgtagaagttaag
ggggttgaaggcttagtccattattctgaaatcagccataaaggaccggtaaaccctgaa
aaatactacaaagagggcgatgaagtctgtgtcaaagccatcgcttatgatgaagaaaaa
agacgcctttcactctccataaaagcgaccatagaagacccatgggaagagatccaagac
aagctaaaacccggatacgccattaaggtggtggtgagcaatattgaaaattatggggcg
tttgtggatattggtaatgatattgaaggctttttgcatgtttctgaaatctcttgggat
aaaaatgtcagccaccctagcaactatttgagcgtggggcaagagattgatgtgaagatc
attgacattgatccaaaaaatcgtcgcttaagggtttctttaaagcaactcactaacagg
ccttttgatgtttttgaatccaaacaccaagtgggggatgttttagaaggcaaagtggcg
actttaacggattttggggcgtttttgaatctgggtggggtggatggtttgctccacaat
cacgacgctttttgggataaagataaaaaatgcaaagaccactataaaattggcgatgtg
atcaaagtgaaaatccttaaaatcaacaaaaaagatagaaagatttctttgagcgcgaag
cacttagttacttcccctacagaagaattcgctcaaaagcataaaacagacagcgtgatt
caaggcaaagtggtgagtattaaggattttggcgtcttcattaacgctgatggcattgat
gtgctcatcaaaaatgaagatttgaacccattgaaaaaagatgaaatcaaaatagggcaa
gaaatcacatgcgtggtggttgcgattgaaaaatctaacaacaaagtgcgcgcttctgtg
cataggttagagcgcaaaaaagaaaaagaagagttgcaagcttttaacacgagcgatgat
aaaatgactttaggggatattcttaaagaaaaactctaa
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