Helicobacter pylori Shi470: HPSH_06490
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Entry
HPSH_06490 CDS
T00742
Name
(GenBank) hypothetical protein
KO
K13893
microcin C transport system substrate-binding protein
Organism
hps
Helicobacter pylori Shi470
Pathway
hps02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hps00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HPSH_06490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hps02000
]
HPSH_06490
Transporters [BR:
hps02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
HPSH_06490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TraF_2
Motif
Other DBs
NCBI-ProteinID:
ACD48698
LinkDB
All DBs
Position
complement(1276716..1278497)
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AA seq
593 aa
AA seq
DB search
MKILGLWLGVFCFLKATPYLYLGEEPKYKDNFTHFEYANPNARKGGVLRNDAIGTFDSLN
PFALKGTKAEGLDLIYDTLMVQSLDEPFAEYPLIAKDAEVAKDNSYVIFTLDKRARFSNN
APILASDVKFSFDTIMELGSPIYRQYYQDVKKAVILDKHHVKFIFKTTENKELPLILGQL
QIFSKKAFQKDYFTKNPLLIPVSSGPYVIASFDVGKKITYQRNPNYWARNLPSRKGQFNF
DQVKFEYYKDETVALQAFLSGAYDWRIESTAKVWARGYVGKAIDNKKITKYLIAHKMPSG
MQGFFFNTRREIFKDKRVREALFYAFDFEWANKNLFFSQYKRTTSFFSNSIYASPPLPSP
EEKILLTPYEKSLDERVFKEPYVVPRTDGPDVLGYNLRENLKYAQNLLKSAGFSYKNMRL
VDKNNKPFSFTLLLNSPAFERLALAFAKNLRVLGIEMKIQRVDLSQYVNRVKSYDFDMIV
GVIGQSSFPGNEQRFYFGSLSAKEKGTRNYAGISSKAVDDLIEKIINAKDYKEQLAAIQA
MDRVLLWGFYVIPHFYLPNYRIAAYNYIGMPEISPNYGFSPYLWWVKKERGLQ
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttaggcttatggttaggggtgttttgtttccttaaggctacgccttattta
tacttgggcgaagagcctaaatataaagacaatttcacgcattttgaatacgctaaccct
aacgctagaaaaggcggtgttttaaggaatgacgctatagggacttttgatagccttaac
ccttttgcacttaaaggcactaaagccgaaggcttggatctgatttatgacactttaatg
gtgcaaagtttggacgaaccttttgcagaataccccttaatcgctaaagacgcagaagtg
gctaaggataacagctatgtgatttttaccttagacaaaagagcgagattcagcaataac
gctcccattttagcgagcgatgtgaagtttagttttgatacgataatggaattaggatcg
cctatttataggcagtattaccaagatgttaaaaaagcggttattttagacaaacaccat
gttaaattcattttcaaaaccactgaaaataaagaattgcctctcattttagggcagttg
caaatcttttccaaaaaagcgtttcaaaaggattatttcaccaaaaaccctttactcatt
cctgtttctagcggcccttatgtgatcgcttcttttgatgtgggcaagaaaatcacctac
caaagaaaccccaattattgggcgaggaatttgcctagcagaaaggggcaattcaatttt
gatcaggtcaaatttgagtattataaagacgaaaccgtcgccttacaggcttttttaagc
ggagcgtatgactggcgcattgaaagcacggctaaggtttgggctaggggttatgtgggg
aaagctatagacaataaaaaaatcactaaatacctaatagcccataaaatgccaagcggc
atgcaagggtttttcttcaacacgcgccgggaaatttttaaggataaaagggtgcgtgaa
gccttattttatgcgtttgattttgaatgggcgaataaaaatttgtttttttcgcaatac
aaacgcaccaccagcttttttagcaattctatttatgcgtccccccctcttccaagccct
gaagaaaaaattctgttaaccccttatgaaaagagtttggatgaaagggtttttaaagag
ccttatgtcgtgcccagaaccgatgggcctgatgttttgggctataatttgagggaaaat
ttaaaatacgcccaaaaccttttgaaaagcgcgggcttttcttacaaaaacatgcgttta
gtggataagaataacaagccgtttagtttcactttgcttttaaacagcccggcctttgaa
agactggccctagcctttgctaaaaacttaagggtgttagggattgaaatgaaaatccaa
agagtggatttaagccagtatgtcaatcgggtcaaaagctatgattttgacatgattgta
ggggtgataggccaatcgtctttcccgggtaatgagcaacgcttttattttggctctttg
agcgctaaagaaaaaggcacaaggaattatgcgggaatctctagtaaagcggtagatgat
ttgattgaaaaaatcattaacgctaaagattacaaggagcaactagccgccattcaagcg
atggatagggtgctgttgtgggggttttatgtgataccgcatttttatttgcctaattac
aggatcgcagcgtataattacattggcatgcctgaaatcagccctaactatggattttcg
ccgtatttatggtgggtaaaaaaagaaaggggtcttcaatga
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