Helicobacter pylori Shi470: HPSH_06970
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Entry
HPSH_06970 CDS
T00742
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hps
Helicobacter pylori Shi470
Pathway
hps03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPSH_06970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hps03400
]
HPSH_06970
Enzymes [BR:
hps01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPSH_06970
DNA repair and recombination proteins [BR:
hps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPSH_06970
Prokaryotic type
HPSH_06970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACD48792
UniProt:
B2UVB0
LinkDB
All DBs
Position
complement(1351985..1352686)
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AA seq
233 aa
AA seq
DB search
MKLFDCAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFYALNLTPPS
AVKIILLGQDPYHSTYLKNQQELPVAMGLSFSVGKNAPIPPSLKNIFKELHANLGVSVPC
CGDLSAWAKRGMLLLNAILSVEKNQAASHKRIGWEAFSDQILMRLFEANAPLIVVLLGKI
AQKKIALIPKNKHIIITAPHPSPLSRGFLGSGVFTSIQNAHREIYHKDFDFSL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaaactttttgactgcgctcctttaagtttggcttggcgggagtttttgcaaagcgaa
tttaaaaagccttattttttagaaatagaaaaacgttacttagaagctctaaaaagccct
aaaaccattttccctaaaagctctaatctgttttatgcactcaatctaacgccccctagt
gcggttaaaatcatccttttagggcaagatccctaccattccacctacctaaaaaatcag
caagaattgcctgtggcgatgggtttaagctttagcgtgggaaaaaacgcccccatcccc
ccaagcttaaaaaatatttttaaagaattgcatgcgaatttaggcgtgtctgtgccttgt
tgtggggatttgagcgcatgggctaaaaggggcatgctgttgttgaacgccattttaagc
gtggaaaaaaaccaagccgcttcgcacaaacgcatcggctgggaagcttttagcgatcaa
atattgatgcgcctttttgaagccaacgcccccttgatcgtggtgttattaggaaagatc
gcacaaaaaaagatcgctctaatccccaaaaacaagcacatcatcatcaccgcccctcac
cctagccccttatctagggggtttttagggagtggggtttttacaagcatccaaaacgcc
cacagagagatttatcataaggattttgattttagtttatga
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