Helicobacter pylori Shi470: HPSH_07970
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Entry
HPSH_07970 CDS
T00742
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hps
Helicobacter pylori Shi470
Pathway
hps03030
DNA replication
hps03430
Mismatch repair
hps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPSH_07970
03430 Mismatch repair
HPSH_07970
03440 Homologous recombination
HPSH_07970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hps03032
]
HPSH_07970
03400 DNA repair and recombination proteins [BR:
hps03400
]
HPSH_07970
Enzymes [BR:
hps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPSH_07970
DNA replication proteins [BR:
hps03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPSH_07970
DNA repair and recombination proteins [BR:
hps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPSH_07970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ACD48979
LinkDB
All DBs
Position
complement(1553522..1554385)
Genome browser
AA seq
287 aa
AA seq
DB search
MSDSLLHKDIQALIARLKHQDLSLGMLEKSLSRLIYDEVNLEYLKACGLNFVETSENLIT
LKNLKTPLKDEVFSFIDLETTGSCPLKHEILEIGAVQVKGGEIINRFETLVKVKSVPDYI
TELTGIAYEDTLNAPSAHEALQELRLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNL
KLCTLDLSKRAILSMRYSLSFLKELLGFGIEVSHRAYADALASYKLFEICLLNLPSYIKT
TMDLIDFSKCANTLIKRPPRARHQETPPPFSLFERTKGLLNIIKATS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagcctcttgcataaagacattcaagccctaatcgctcgcttaaagcaccag
gatttaagcttgggcatgctagaaaaatcgctctctcgccttatttatgatgaagtcaat
ttggaatatttaaaagcatgcgggcttaatttcgtagaaacgagtgaaaatttaatcacg
ctcaaaaaccttaaaaccccccttaaagatgaggttttttcctttattgatttagaaacc
accggctcttgccccctaaaacatgagattttagaaatcggagccgtgcaagtgaagggg
ggggaaatcatcaatcgttttgaaacccttgtgaaagtcaaaagcgtgcctgattatatc
actgagcttacaggcatcgcttatgaagacaccctaaacgccccaagcgcgcatgaagct
ttgcaagaattgcgcctttttttaggcaacagcgtgtttgtagcccataacgctaatttt
gattacaactttttagggcgttattttgtagaaaaattgcattgccccttattgaattta
aagctttgcactttggatttatccaaacgggccattttgtccatgcgttattctttgagc
tttttaaaagagcttttggggtttggtatagaagtcagccatagagcctatgcggacgct
ttagcgagctataagctctttgaaatatgcttattaaacttgcccagttacatcaaaacg
acgatggatttgattgatttttccaaatgcgctaacaccttgatcaaaagacctccaaga
gccagacaccaagagactccaccgccattttctctttttgagaggacaaagggtttgtta
aatatcataaaagcaactagttaa
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