Helicobacter pylori Shi470: HPSH_08020
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Entry
HPSH_08020 CDS
T00742
Name
(GenBank) helicase
Organism
hps
Helicobacter pylori Shi470
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Cas_Cas4
DEAD
AAA_30
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
ACD48989
LinkDB
All DBs
Position
1560501..1563350
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AA seq
949 aa
AA seq
DB search
MDTKRQCMALKASAGSGKTFALSVRFLALLFKGANPSEILTLTFTKKATAEMKERILDYL
KILQKENLESEKEKEKSQNILKELEEKYRLNPSLVQNSAQKIYQRFLNAEMRISTIDAFF
QSILRKFCWFVGLSANFEVNEDTKVHQQQLNASFLSALNNEQLEELSVFITQCLSHDNYT
SDSILERLRFLKNKLYLFDPNKKEPAFDEESFLEKLRSLNQQIQSVETASDTAKTAIKCD
DFRGFLNSSLTWLEKKSEYRSFKKLKDEIPTLESECEEIENDLKRYYEAKESALFKKFPK
FIQLYDKATSKIQALDFDAIKDKVHALLNGYEEMPAEFFYFRLDSRIAHILIDEFQDTSL
NDYKILAPFIDEIKAGIGQAKWHRSVFFVGDVKQSIYGFRGSFSSLFESVSKEFYHDNLQ
FNHRSSPLIINYVNTIFKKAYQNSPTAYLEQKYPKASSNKHARDGYVKVSLVADGRELLL
EQILQEAKNLLEHRIDPKDITLLCATNDDALEIKNYLQENLSAIRPSTESSAKLSQFVES
KIIKNALEYALAEEPYKPFYKHSVLKLAGYLHDDAIALAGFNPKKESVAGFVWKVMELFE
LYGECAQICLELAVGCEDANEFLEKLEAKEIASFNAKGAQIMTIHKSKGMQFPYVIVCER
LGKPKSNSSNQFLEEYSGTELLHLYYRMKNREVVDKDYARALDKEEAAKDHEETNVYYVA
FTRAELGLIVVAKDKDQKKDKKESKSKGMREKLDLLPLEEGEIAPVISSQKEPLIASVVI
KPHAYGEQVQEIEEEPSDYEKNNDQEAINFGIALHKGLEYQYAYNIPKKSVLEYLNYHHG
FYGLDYQALEESLELFENDAKIQALFKNLALRGEVAFLFEGVVSRIDVLLWDKGQNLYVL
DYKSSQNYQQSHKAQVSHYAAFLQTQAPHFKIQAGIIYAHKRLLEKLWV
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaaaagacaatgcatggctttaaaggcttcagcaggaagtgggaagactttc
gctttgagcgtgcggtttttggccctgttgtttaagggggctaatcctagcgagattttg
acgctcactttcactaaaaaagccaccgccgaaatgaaagagcgtattttagactattta
aaaatcttgcaaaaagaaaaccttgaaagcgaaaaagaaaaagaaaaatcccaaaatatc
ctaaaagaattagaagaaaaataccgcttaaaccctagtttggtgcaaaatagcgctcaa
aaaatctaccaacgctttttaaacgccgaaatgagaatcagcaccattgatgcgtttttc
caaagcattttaaggaaattttgctggtttgtggggttgagcgcgaattttgaagtcaat
gaagacacaaaagtgcaccaacaacagctcaatgcgagttttttgagcgctttaaataat
gaacagcttgaggaattgagcgtttttatcactcaatgcttaagccatgataattacaca
agcgattctattttagagcggttgcgttttttaaaaaacaagctctatttatttgatcct
aacaagaaagagcctgcatttgatgaagagagttttttagaaaaactaagaagcttaaac
caacaaattcaaagcgtagaaacagcgtcagatacggctaaaacagccattaaatgcgat
gattttagagggtttttaaacagctctttaacctggcttgaaaaaaagagcgaataccgc
tctttcaaaaaactcaaagatgaaatccccactttagagagcgaatgcgaagagattgaa
aacgatctaaaacgctattatgaagccaaagaaagcgcattgtttaaaaaattccctaaa
ttcatccagctttatgataaagccacttctaaaatccaagccctggattttgatgcgatt
aaagataaagtccatgccttattgaatggctatgaagaaatgccggcggagtttttttat
ttcagattggacagcaggatcgcacacattttgattgatgaatttcaagacacgagcttg
aacgattataagattttagccccttttattgatgagattaaagccgggatagggcaagct
aaatggcacaggagcgtgttttttgtgggcgatgtcaagcagagcatttatggctttagg
gggagttttagctccttgtttgaaagcgtttctaaggaattttaccacgataatttacaa
ttcaaccaccgtagttcgcctttgatcattaattatgtgaataccatttttaaaaaggct
tatcaaaattcccccaccgcttatttggagcaaaaataccctaaagcttccagcaataaa
catgctagagacggctatgttaaagtctctttagtggctgatggaagagaattgttatta
gaacaaatcttgcaagaagctaaaaaccttttagagcaccgcattgatcctaaagacatt
acccttttatgcgccactaatgacgacgctttagaaatcaaaaattatttgcaagagaat
ttgagcgcgattcgcccaagcacggaatctagcgctaaattgtctcaatttgtggaatct
aaaatcattaagaacgctttagaatacgctctagctgaagaaccttacaagcccttttat
aagcacagcgttttaaaactcgctggatacttgcatgatgatgccatcgctttagctggt
tttaaccctaaaaaagagagcgtggcaggctttgtgtggaaggtgatggaactgtttgag
ctttatggagagtgcgcgcaaatctgcttggagttggcggttgggtgcgaagatgcgaat
gaatttttagaaaaattagaggctaaagagatcgcttctttcaatgcaaaaggcgcacag
attatgaccatccataaatctaaaggcatgcaattcccttatgtgatcgtgtgcgaacgc
ttgggcaagcctaaatcaaatagctccaatcaattccttgaagaatatagcggcacagag
cttcttcacctttattacagaatgaaaaatcgtgaggtggtggataaagattacgctagg
gctttagataaagaagaagcggctaaagatcatgaagaaaccaacgtgtattatgtcgca
ttcactagggctgagttagggctgattgtcgtggctaaagacaaagaccaaaagaaagac
aaaaaagaaagcaaaagcaaaggaatgcgcgaaaaattggatcttttgcctttagaagag
ggagaaatcgcgccggttatttcttctcaaaaagagcctttaattgcaagcgttgtaatc
aaaccccatgcctatggcgagcaagtccaagagatagaagaagagcctagcgattatgaa
aagaataacgaccaggaagcgatcaattttggtatcgccttgcacaagggattagaatac
caatacgcttataatattcctaaaaaaagcgttttagaatatttaaactaccatcatggt
ttttatggtttggattaccaagcgttagaagaaagtttagagctttttgaaaacgatgcc
aagatacaagctctttttaaaaatttggccctaaggggcgaagtggcttttttatttgaa
ggggttgtgtctaggattgacgttttattgtgggataaggggcaaaatttgtatgtttta
gattataaaagctctcaaaattaccagcaaagccataaggcgcaagtttctcattacgct
gcgtttttgcaaactcaagccccccattttaagatacaagcgggcattatttacgctcat
aaaagactgcttgaaaaattatgggtttga
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