Hydrogenophaga pseudoflava: HPF_00280
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Entry
HPF_00280 CDS
T06073
Symbol
cfiB
Name
(GenBank) 2-oxoglutarate carboxylase small subunit
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
hpse
Hydrogenophaga pseudoflava
Pathway
hpse00220
Arginine biosynthesis
hpse00791
Atrazine degradation
hpse01100
Metabolic pathways
hpse01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
HPF_00280 (cfiB)
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
HPF_00280 (cfiB)
Enzymes [BR:
hpse01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
HPF_00280 (cfiB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Dala_Dala_lig_C
Biotin_lipoyl
Biotin_lipoyl_2
ATP-grasp
ATP-grasp_5
ATP-grasp_3
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
QBM26091
UniProt:
A0A4P6WXL7
LinkDB
All DBs
Position
complement(63838..67464)
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AA seq
1208 aa
AA seq
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MFRKVLIANRGAIACRIIRTLKALGVQSVAVYSEADAQARHVREADEAYLLGPAPAAESY
LKAERILQIARDCGAEAIHPGYGFLSENPGFAQACEDAGIAFIGPTLAQMRAFGLKHTAR
DLAEQRGVPLLPGTGLLADAAQARAEAQRIGYPVMLKSTAGGGGIGMRLVWSEDELSDAF
ASVQRLASANFKDAGLFLEKYVEQARHIEVQVFGDGSGTVLALGERDCSVQRRNQKVIEE
TPAPGLTDAQRAELHATAVRLAQAVNYRSAGTVEFVYDAATGQFYFLEVNTRLQVEHGVT
EQVTGVDLVAWMVQLAAGDLPPLATLAPTPQGASIQVRLYAEDPAKNFQPSAGLLTEVVF
PPDARVDGWVERGTEVPAWYDPMLAKLIVTAPDREQALHKLDAALAATRLAGIETNLGYL
RQVVRDPVFREGRQVTRFLNSFHFRPATVEVVEPGVQTSVQDWPGRLGHWDVGVPPSGPM
DAYAHRMANRLVGNADDAAALEITLSGPTLRFNADAVIAVTGAPVKVMLDGQSLPLWQSH
RVAAGSVLAIGRAEAGARLCLAVGGGFDVPLYLGSRSTFTLGQFGGHAGRHLRTGDVLHL
AAPGAGTAGVSASPATVPAFTHHWDVGVLYGPHGAPDFFTPDDVATFFATDWEVHYNSSR
TGVRLIGPKPQWARADGGEAGLHPSNIHDNAYAIGAIDFTGDMPVILGPDGPSLGGFVCP
AVVVDAELWKLGQLRPGDTVRFHRLSLDQALERSAMVEAALSSLTQPLPATPADDASAHP
TPVVHEDPAREDEAVPAMVVRQAGDRYLLVEFGPLVLDIELRLRVHVLMQALQARMAAGT
LPGIVDMTPGIRSLQLHFDPAKVSRAELLKVLVEAEAALPAVDDMEVPSRIVHLPLSWDD
PQTKLAIEKYMQSVRPDAPWCPSNIEFIRRINGLDSIDDVFKVVFDASYLVLGLGDVYLG
APVATPVDPRHRLVTTKYNPARTWTPENAVGIGGAYLCVYGMEGPGGYQFVGRTLQMWNR
WRHGEAGSVFEQPWLLRFFDQIRFVPVNQDELLRIRAAFPHGGYALQVEETSFSLRDYRR
FLADNAASIGAFKAQQQASFDAERERWAASGQLTYAGDADVAAADASVELDLPPGGRPLA
SSVPGSVWKVLVSEGQRVAAGDVLLVVESMKMEFSVLAPQDATVHRLMCREGAPVAAGQD
VLVLVTEE
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaaggtcctgatcgccaaccgcggcgccatcgcctgccgcatcatccgcacg
ctcaaagccctgggcgtacagagcgtggccgtgtattccgaagccgacgcgcaggcccgc
cacgtgcgtgaagccgacgaggcctacctgctcggccccgcacccgcggccgagagctac
ctcaaggccgagcgcatcctgcagatcgcacgcgactgcggtgccgaggccatccacccc
ggctacggcttcctgtcggagaacccgggcttcgcccaggcctgcgaagacgcgggcatc
gccttcatcggccccacgctggcgcagatgcgcgccttcggcctcaagcacacggcgcgc
gacctggccgaacagcgcggcgtgccgctgctgcccggcaccggcctgctggcggacgcg
gcgcaggcccgcgccgaggcgcaacgcattggctacccggtcatgctcaagagcacggcc
ggcggcggcggcatcggcatgcgcctggtgtggagcgaagacgaactcagcgacgcgttt
gcctcggtgcagcgcctggccagcgccaatttcaaggacgccggcctcttcctggaaaag
tacgtcgagcaggcgcgccacatcgaggtgcaggtgttcggcgacggctcgggcacggtg
ctcgcgctgggcgagcgcgactgttcggtgcagcgccgcaaccagaaggtgatcgaagag
acgcctgcgccgggcctgacggatgcgcagcgtgccgagctgcacgccaccgcggtgcgg
ctggcgcaggcggtgaactaccgctcggccggcacggtggagtttgtgtacgacgccgcc
accggccagttctatttcctcgaagtcaacacccgtctgcaggtggaacacggcgtgacc
gagcaggtcaccggggttgatctggttgcgtggatggtgcagctcgccgccggcgatctg
ccgccgttggccacgctggcgcccacgccgcagggcgcgtccatccaggtgcggctgtac
gccgaagacccggccaagaatttccagcccagcgccggtctgctgaccgaggtggtgttt
ccgccagacgcccgcgtggacggctgggtcgagcgcggcaccgaggtgcccgcctggtac
gaccccatgctggccaagctcatcgtcaccgcgcccgaccgcgagcaggcgttgcacaag
ctcgacgccgcgctggccgccacgcgcctggccggcatcgagaccaacctgggctacctg
cgccaggtggtgcgcgatccggtgttccgcgaaggccggcaggtcacgcgttttctcaac
agcttccacttccgccccgcgacggtggaggtggtcgagcccggcgtgcagaccagcgtg
caggactggcccggccgcctgggccactgggacgtgggcgtgccgcccagcggccccatg
gacgcctacgcccaccgcatggccaaccgtctggtgggcaacgccgacgacgcggctgcg
ctggagatcacgctctcgggccccacgctgcgcttcaacgccgacgcggtgatcgccgtg
accggcgcaccggtcaaggtcatgctcgacggccaatcgctgcccttgtggcagagccac
cgcgtggccgcgggcagcgtgctcgccatcggccgggccgaggccggcgcgcgcctgtgc
ctggccgtgggcggcggcttcgacgtgccgctctacctgggcagccgcagcaccttcacg
ctcggccagttcggcggccacgccggccgccacctgcgcaccggcgacgtgctgcacctg
gccgcgcccggcgccggcaccgcgggtgtgagcgcatcccccgccaccgtgcccgccttc
acccaccactgggacgtgggcgtgctctacggcccacacggcgcacccgacttcttcacg
cccgatgacgtggccaccttcttcgccaccgactgggaggtgcactacaactccagccgc
accggcgtgcgcctgatcggccccaagccgcagtgggcgcgtgcggacggtggcgaggca
ggactgcacccctcgaacatccacgacaacgcctacgccatcggcgccatcgacttcacc
ggcgacatgccggtcatcctcggccccgacggccccagcctcggtggtttcgtctgcccg
gccgtggtggtggacgccgaactctggaagcttggccagctgcgccccggcgacacggtg
cgcttccaccggctctcgctcgatcaggcgctggagcgcagcgcgatggtcgaggccgcg
ttgtcgtcactcacgcagcccctgcccgccacgccggccgacgacgcgtcagcccacccc
acgcccgtggtccacgaagaccccgcgcgcgaagacgaggccgtgcccgccatggtggtg
cgccaggccggcgaccgttacctgctggtcgagttcggcccgctggtgctcgacatcgaa
ctgcgcctgcgcgtgcacgtgctcatgcaggcgctgcaggcgcgcatggcagcgggcacg
ctgcccggcatcgtcgacatgacgcccggcatccgttcgctgcagctgcacttcgatccc
gccaaagtctcgcgcgccgagttgctgaaggtgctggtcgaggccgaggccgcgctgccc
gccgtcgacgacatggaggtgcccagccgcatcgtgcacctgccgctgagctgggacgac
ccgcagacgaaactggccatcgagaagtacatgcagtcggtgcggcccgacgcgccctgg
tgcccgagcaacatcgagttcatccgccgcatcaacgggctggacagcatcgacgacgtg
ttcaaggtggtcttcgacgccagctacctggtgctgggcctgggcgacgtgtacctgggc
gcgccggtggccacgccggtggacccgcgccaccgcctggtgaccaccaagtacaacccc
gcgcgcacctggacgcccgagaacgccgtcggcatcggcggcgcctacctctgcgtctac
ggcatggaaggccccggcggttaccagttcgtcggccgcacgctgcagatgtggaaccgc
tggcgccacggtgaggcgggctcagtgttcgagcagccctggctgctgcgcttcttcgac
cagatccgcttcgtgccggtgaaccaggacgagctgctgcgcatccgcgccgcctttccg
cacggcggctacgcgctgcaagtcgaagagaccagcttcagcctacgcgactaccgccgc
ttcctggccgacaacgccgccagcatcggcgccttcaaggcgcagcaacaggcgtccttc
gacgccgagcgcgagcgctgggccgccagcggccagctgacatatgcgggcgatgccgac
gtggccgcggccgacgccagcgtggagctggacctgccgcccggcggccgcccgctggcc
agcagcgtgcccggcagcgtgtggaaggtgctggtcagcgaaggccagcgcgtggccgcg
ggcgacgtgctgctcgtcgtcgagtccatgaagatggaattcagcgttctcgccccgcag
gacgccaccgtgcaccgcctcatgtgccgcgaaggcgcgcccgtggccgctggccaggac
gtgctggtgctcgtcaccgaagaatga
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