Hydrogenophaga pseudoflava: HPF_01545
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Entry
HPF_01545 CDS
T06073
Symbol
spoVD
Name
(GenBank) Stage V sporulation protein D
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hpse
Hydrogenophaga pseudoflava
Pathway
hpse00550
Peptidoglycan biosynthesis
hpse01100
Metabolic pathways
hpse01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPF_01545 (spoVD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HPF_01545 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpse01011
]
HPF_01545 (spoVD)
Enzymes [BR:
hpse01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HPF_01545 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
hpse01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HPF_01545 (spoVD)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
QBM26344
UniProt:
A0A4P6WYH5
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All DBs
Position
complement(312314..314263)
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AA seq
649 aa
AA seq
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MTELRNVEADLAQFRTRVVVAGLAVLFAFGLLAARMVYLQVLRHDELDAQAESNRTAVLP
VVPNRGQILDRHGRVLATNFSAYTLEITPSKVEDLDGTIEALGELVDIQPRDKRRFRKLL
EESRRFDSLPIRTRLTDDEVARFTAQRYRFPGVDVRARLIRHYPHGEVASHVIGYIGRIN
QREKESIEEWPEEDQANYRGTDHIGKLGTEQQYERELHGVTGFDRVETSAGGRAVRSLAN
TPATPGNTVVLSIDIKLQKLVEDMFGERRGALVAIDPRNGEVLAFVSKPTFDPNLFVEGI
DSESWKALNESLDKPLLNRALRGTYPPGSTYKPFMALGALETGTRSASSVINDPGYWMFG
NHRFRSHGDGGLGAVDMHRSIVKSSNVYYYSLANEMGVEAMHDFMAPLGFGQITGIDLKG
EVRGVLPNQEWKRKTYKRPEQQKWYPGETISLGIGQGYNNFTMLQLAHAMATLAGGGIKR
TPHLTLATENVLTRERTPLPTPAEVNLGFKRQNIDTVLRAMHGVTVEGTSTRVFAGAGYL
SGGKTGTAQAVTIGQKDRYDARKLEEHQRDHSLYLAFAPLENPTVALAVVVENAGFGAAA
AAPIARRVFDYLLMDQYPNPQDLAAVQKGEAGPPIGTPLKASEVPWDSP
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacttcgcaatgtcgaagccgacctggcgcagttccgcacccgggtggtggtg
gcggggctggcggtgctgtttgcgttcggcctgctggccgcgcgcatggtctacctgcag
gtgctgcgccacgacgagctcgacgcccaggccgagagcaaccgcaccgcggtgctgccg
gtggtgcccaaccgcgggcagatcctggaccggcacggccgcgtgctggccaccaacttc
tcggcctacacgctggagatcaccccctccaaggtcgaggacctggacggcaccatcgag
gcgctgggcgagttggtcgacatccagccgcgcgacaagcggcgcttccgcaagctgctc
gaagagtcgcggcgcttcgattcgctgcccatccgcacccgcctgaccgacgacgaggtc
gcccgcttcaccgcgcagcgctaccgttttcccggggtggatgtgcgcgcgcgcctgatc
cgccactacccccatggcgaggtcgccagccatgtgatcggctacatcggccgcatcaac
cagcgggagaaggaaagcatcgaggagtggccggaagaagaccaggccaactaccgcggc
accgaccacatcggcaagctgggcaccgagcagcagtacgagcgcgagttgcacggcgtc
accggtttcgaccgcgtcgagacctcggccggcggccgcgccgtgcgttcgctggccaac
acgccggccaccccgggcaacaccgtggtcctgtcgatcgacatcaagctgcagaagctg
gtggaggacatgttcggcgagcgccgtggcgcgctggtggccatcgacccgcgcaacggc
gaggtgctggccttcgtctccaaaccgaccttcgaccccaacctgttcgtcgaaggcatc
gactcggaaagctggaaagcgctcaacgagtcgctggacaaacccctgctcaaccgcgcc
ctgcgcggcacctacccgcccggctccacatacaagcccttcatggccctgggcgcactg
gaaaccggcacccgcagcgcgagctccgtcatcaacgacccgggctactggatgttcggc
aaccaccgcttccgcagccacggcgacggcggcctgggcgcggtcgacatgcaccgcagc
atcgtcaagtcgagcaacgtctactactactcgctggccaacgagatgggtgtggaggcc
atgcacgacttcatggcgccgctgggcttcggccagatcaccggcatcgacctcaagggc
gaggtgcgcggcgtgctgcccaaccaggagtggaagcgcaagacctacaagcggcccgag
cagcagaagtggtacccgggcgaaaccatctcgctgggcatcggccagggctacaacaac
ttcaccatgctgcagctggcccacgccatggccacgctggcgggcggcggcatcaagcgc
acgccccacctgacgctggccaccgagaacgtgctgacgcgcgagcgcacgcccctgccc
acgcccgccgaagtcaacctggggttcaagcgccagaacatcgacaccgtgctgcgcgcc
atgcacggtgtcactgtcgaaggcacgtcgacgcgggtgttcgccggtgccggctacctc
agcggtggcaagaccggcacggcccaggcggtgaccattggccagaaggaccgctacgac
gcccgcaaactcgaagaacaccagcgcgaccactcgctctacctggccttcgcgcccctg
gagaaccccaccgtggcgctggccgtggtggtcgagaacgcgggcttcggcgcggccgct
gcggcgccgatcgcgcggcgcgtgttcgactacctgctgatggaccagtacccgaacccg
caggacctggccgcggtgcagaagggagaagccggcccgcccatcggcacgccgctcaag
gccagcgaggtgccctgggacagcccctga
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