Hydrogenophaga pseudoflava: HPF_04510
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Entry
HPF_04510 CDS
T06073
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hpse
Hydrogenophaga pseudoflava
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpse03400
]
HPF_04510 (phrA)
Enzymes [BR:
hpse01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HPF_04510 (phrA)
DNA repair and recombination proteins [BR:
hpse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HPF_04510 (phrA)
Prokaryotic type
HPF_04510 (phrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QBM26933
UniProt:
A0A4V1AB70
LinkDB
All DBs
Position
complement(916432..917907)
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AA seq
491 aa
AA seq
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MTRYDRGLMWFRRDLRVQDNAALHHALKHCRQVWCVFVFDTEILDPLPRADRRVEFIHAS
VLELDAGLRALGARHGRERTGLIVRHAAAREDIPRLARQLHVQAVFTNHDDEPAALARDA
QVLGALAHAGVMLHSHKDHVIFERREVLTQAGQPFGVFTPYKNAWLRKIEPFFLKAYPVD
KYAPALAPLPDAMDGPLPRMSDLDFETTNLSKLPMPTGASGAQTLLADFMERIERYDTAR
DFPAVKGPSYLSVHLRFGTVSVRQLASLAWQMHLQGMKGASTWLSELIWRDFYHQILANF
PHVVSKAFRPEYDKVRFEHGKHAQALFAAWCEGRTGYPLVDAAMAQINQTGYMHNRLRMV
VASFLVKDLGIDWRWGERYFAEKLIDFDLAANNGGWQWAASTGCDAQPWFRIFNPVTQSE
KFDPQGKFIRRYLPQLAGLSDAAIHAPWKAPELELVAADVRLGQTYPNPIVDHAIARERT
LERYAVVKRCP
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgacacgctacgacagaggactgatgtggttccggcgcgacctgcgggtgcaggacaac
gccgccctgcaccacgcgctcaaacactgccgccaggtctggtgcgtgttcgtgttcgac
acggagatcctcgacccgctgccgcgcgccgaccggcgggtggagttcatccacgccagc
gtgctcgaactcgatgccgggctgcgcgccctgggcgcccggcacggccgcgagcgcacc
ggcctcatcgtgcggcacgcggccgcgcgcgaagacatcccgcggctggcccggcagctg
catgtgcaagcggtgttcaccaaccacgacgacgagcccgcagccctggcccgcgatgcc
caggtgctgggcgcgctggcacacgccggcgtcatgctgcacagccacaaggaccatgtg
atcttcgaacgccgcgaggtgctgacccaggccggccagccgttcggcgtgttcacgccc
tacaagaacgcctggctgcgcaagatcgagcccttctttctcaaggcctatcccgtcgac
aagtacgcaccggccctcgcaccactgcccgatgcgatggatgggccgctgccccggatg
tctgatctggacttcgagaccaccaacctgtcgaagctgcccatgcccaccggcgccagc
ggtgctcagaccctgctggcggatttcatggagcgcatcgagcgctacgacaccgcgcgc
gactttccggcggtcaagggccccagctacctgagcgtgcacctgcgcttcggcacggtg
tcggtccgccagctggcctcgctggcctggcagatgcacctgcagggcatgaagggggcc
agcacctggctatcggagctgatctggcgcgatttctatcaccagatcctggccaacttt
ccgcacgtggtgagcaaggcattccgccccgagtacgacaaggtgcgcttcgaacatggc
aaacacgcgcaggcgctgttcgcggcctggtgcgagggccgcaccggctacccgctggtg
gacgcggccatggcccagatcaaccagaccggctacatgcacaaccggctgcgcatggtg
gtggccagcttcctggtgaaggacctgggcatcgactggcgctggggcgagcgctacttc
gccgagaagctgatcgacttcgacctggccgccaacaacggcggctggcagtgggcggcc
tcgaccggctgcgacgcccagccctggttccgcatcttcaacccggtgacgcagagcgag
aagttcgacccccagggcaagttcatccgccgctacctgccacagctggcagggttgtcc
gacgcggcgatccacgctccctggaaggcgcccgaactggaactggtggcggcggatgtg
cgcctgggccagacctacccgaacccgatcgtcgaccacgccatcgcccgcgagcgcacg
ctggaacgctacgcagtggtcaagcgctgcccctga
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