Hydrogenophaga pseudoflava: HPF_06365
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Entry
HPF_06365 CDS
T06073
Symbol
sspH1
Name
(GenBank) E3 ubiquitin-protein ligase sspH1
Organism
hpse
Hydrogenophaga pseudoflava
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
Pkinase
PK_Tyr_Ser-Thr
Kdo
LRR_LRWD1
LRR_9
LRR_R13L1-DRL21
LRR_At5g56370
TCAD9
RIO1
ABC1
APH
Motif
Other DBs
NCBI-ProteinID:
QBM27301
UniProt:
A0A4P6X0P8
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All DBs
Position
1294237..1295550
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AA seq
437 aa
AA seq
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MHTLEQLRRGDLAGAPRLDLSCGLTELPAEVLGLADSLEVLNLSGNRLTTLPTWLPRLQR
LKVIFASDNPFTTLPEVLGDCPALEMVGFKACRINRVPAAALPRALRWLILTDNAIESLP
DAVGERSRLQKLMLAGNRLQALPEGLAGAQRLELLRISANRFERLPDWLLRLPRLSWLAL
AGNPLGWAVPPLELPVVDWGDIRPGEALGEGASGRALRARVAGRPDELALKLFKGAVTSD
GLPEHEMAAGGAAGAHPALCTPVARLQGHPDGAQGMLLPLIPPGHVLLAGPPSLASCTRD
VYPDGWRLAAGPALRLLRGMADAVAHLHGHGVVHGDLYAHNILWNPATGDALLSDFGAAA
LLPADQPALARALQALEVRAFGCLLEELGDRLDVLPGDGLRAMMAGLAASCLDTDPGARP
SMAEVSRQLFKEVSCSC
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccctcgaacaactgcggcgcggcgacctggccggcgcaccccgcctcgacctc
tcctgcggcctgaccgaactgcccgccgaggtgctcggcctggccgattcgctggaggtg
ctcaacctcagcggcaaccgcctgaccacactgcccacgtggttgccgcggctgcagcgg
ctcaaggtgatcttcgcgtcggacaaccccttcaccacgctgcccgaggtgctgggcgac
tgcccggcgctggagatggtgggcttcaaggcctgccgcatcaaccgggtgcccgccgcc
gcgctgccgcgggccttgcgctggctgatcctcaccgacaacgccatcgagagcctgccc
gatgcggtgggcgagcggtcgcgcctgcagaagctcatgctcgccggcaaccggctgcag
gctctgccagaggggctggccggggcgcagcggctggagctgctgcggatctcggccaac
cgttttgaacgcctgcccgactggctgctgcgcctgccgcgcctgtcgtggctggcgctg
gccggcaacccgctgggctgggcggtgccgccgctggagcttccggtggtggactggggc
gacatccggccgggcgaggccctgggcgaaggcgcctcgggccgggccctgcgcgccagg
gtggccgggcggcctgacgaactggccctcaagctgttcaagggcgccgtcaccagcgac
ggcctgcccgagcacgaaatggccgccggtggtgccgcgggcgcgcaccccgcgctgtgc
accccggtggcccggctgcagggccaccccgacggcgcgcagggcatgctgctgccgctg
atcccgcccgggcacgtgctgctggcgggcccgcccagcctggccagctgcacgcgcgac
gtctaccccgacggctggcgcctggccgccgggccggcgctgcgcctgctgcgcggcatg
gccgacgcggtggcccacctgcacggacacggcgtggtgcacggcgacctctatgcccac
aacatcctgtggaacccggccaccggcgacgccctgctcagcgacttcggcgccgccgcc
ctgctgccggctgaccagccggcgctggcccgcgcgctgcaggcgctggaggtgcgggcc
ttcggttgcctgctggaggaactgggagatcgtctcgatgtcctacccggagacgggctg
cgtgccatgatggccggcctggccgcgtcctgcctggacaccgaccccggcgcccgaccc
tcgatggccgaggtgtcccgccaactcttcaaggaggtttcatgctcgtgctga
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