Hydrogenophaga pseudoflava: HPF_06600
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Entry
HPF_06600 CDS
T06073
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
KO
K06958
RNase adapter protein RapZ
Organism
hpse
Hydrogenophaga pseudoflava
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpse03019
]
HPF_06600
Messenger RNA biogenesis [BR:
hpse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HPF_06600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_28
AAA_23
AAA_29
AAA_16
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QBM27346
UniProt:
A0A4P6WY77
LinkDB
All DBs
Position
complement(1335954..1336892)
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AA seq
312 aa
AA seq
DB search
MNTPDPAQPLKPIELVLITGMSGSGKSIALTALEDLGYYCVDNLPPELLASFIALEQSHR
ASKVAIAMDVRSAASLPGLPARLAEIRHQPGQDVHLTTVFLDATTDTLVRRFSETRRRHP
LSLKPSNDEHRALTDAIEYERELLSELRDRAQVLDTSLIRPAQLRSHIKELIGAQQAPLT
LVFESFAFKRGIPMDADFVFDVRMLPNPHYEPDLRPLTGRDGPVATFLARHAEVAVMQEQ
IDTFLRHWLPHMLDDHRSYVTVAIGCTGGQHRSVYLVERLAKAFSSAWSTRLRHREIDGW
PTPPARSASAGP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgccggaccccgcccaacccctcaagccgattgagctggtgctgatcaccggc
atgtccggctctggcaaatcgatcgccctgaccgcgctggaagacctcggctactactgc
gtcgacaacctgccgcccgagctgctggcatcgttcatcgcactggagcagagccaccgt
gccagcaaggtggccattgcgatggacgtgcgcagcgcggcctcgctgcccgggctgccc
gcgcgcctagccgagatccggcaccagcccgggcaggacgttcacctcaccacggtcttc
ctggacgcgaccaccgacacgctggtgcggcgcttctccgaaacgcgccgccgccacccg
ctgtcgctcaaaccgtcgaacgacgagcaccgggcactcacggacgccatcgaatacgag
cgcgagctgctgtcggagctgcgcgaccgtgcccaggtgctcgacaccagcctgatccgg
ccggcacaactgcgcagccacatcaaggagctgatcggcgcccagcaggccccgctcacc
ctggtgttcgagtcgtttgccttcaagcgcggcattccgatggacgccgacttcgtgttc
gacgtccgcatgctgcccaacccgcactacgaaccggacctgcgcccgctcaccgggcgg
gacgggccggtggccacattcctggcacgtcatgccgaggtcgcggtgatgcaggagcag
atcgacaccttcctgcgccactggctgccgcacatgctcgacgaccaccgcagctacgtc
accgtggccatcgggtgcacgggtggacagcaccggtcggtctacctcgtggaacgcctg
gccaaggcgttttccagcgcctggtccacgcggttgcgccaccgcgagatcgatggctgg
ccaacgcctccggcccggtcggcctccgccgggccctga
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