Hydrogenophaga pseudoflava: HPF_09170
Help
Entry
HPF_09170 CDS
T06073
Symbol
ydcR1
Name
(GenBank) putative HTH-type transcriptional regulator YdcR
Organism
hpse
Hydrogenophaga pseudoflava
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Asp_aminotransf
DegT_DnrJ_EryC1
HTH_24
MarR_2
Cys_Met_Meta_PP
Aminotran_5
HTH_41
TraG-D_C
Motif
Other DBs
NCBI-ProteinID:
QBM27856
UniProt:
A0A4P6WZY6
LinkDB
All DBs
Position
1881297..1882739
Genome browser
AA seq
480 aa
AA seq
DB search
MSSGTLTRYQQLADELAGSIRAGVLRPGDRLPSVRELRRQRGISPSTIFQAYAQLESDGL
VEARLRSGYFVRARRPLTGQPPEAAQPSGRITPVAISELVFELLGSTRDVDVVPLGSAFP
APELFPFEALARGGARAMRRLRPAQISGALTAGDETLRAQVGRRYALNGVSLQTDELIVT
NGAMEALNLCLQAVTQPGDVVVVESPTFYAALQALERLHLKAVEVETDPVEGVRLDALET
LLQRQKVAACWFMPTFQNPLGALMSNAKKQALVQLLARHGVPLIEDDVYAELHFGARRPL
PAKAFDQEGLVLHCSSFSKSLAPGYRVGWAAAGRYARHVERLKMMTSLASPIPSQLAVAE
YLVQGGFERHLRHLREALKTQHTAARALIERFFPKGTRMTEPQGGYFVWLELPPGVDALA
LHHQAMAQSISTAPGVLFSADRRFTRHLRLNVGHPVGPPVRAALKRLGSMAREQIAAAGG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccggcaccttgacgcgttaccagcaactcgccgatgaactggcgggcagcatc
cgtgcgggggtgctgcgcccgggcgaccgcctgccctcggtgcgcgagctgcgccgccag
cggggcatcagtccttccaccatcttccaggcctatgcacagctggaatccgatgggctg
gtcgaggcgcggttgcggtccggctacttcgtgcgcgcacggcgaccgctcaccggccag
ccgccggaggcggctcaacccagcgggcggatcaccccggtggccatcagcgagctggtg
ttcgaactgctgggttccacgcgcgatgtggacgtggtgccgctgggctcggccttcccg
gcgcccgagctgtttccgttcgaggcgctggcgcggggcggggcgcgggccatgaggcgc
ctgcggccggcgcagatctcgggcgcgctgaccgcgggcgatgagaccctgcgggcccag
gtggggcggcgctacgcgctcaacggcgtgtctcttcagaccgacgagctcatcgtgacc
aacggcgccatggaagcgctcaacctgtgcctgcaggcggtgacgcagccgggcgatgtg
gtggtggtcgagtcgcccaccttctatgcggcgctgcaggcgctggagcgcctgcacctg
aaggcggtggaggtcgagaccgacccggtcgagggtgtgcggctggacgcgctcgaaacc
ctgctccagcgccagaaagtggccgcgtgctggttcatgcccaccttccagaacccgctg
ggtgcgctgatgtccaacgccaaaaagcaggccctggtgcagctgctggcgcgccacggg
gtgccgctcatcgaggacgacgtgtacgccgagctgcacttcggtgcgcgccggcccctg
cccgccaaggccttcgaccaggagggtctggtgctgcactgctcgtcgttctccaaatcg
ctggcgccgggttaccgggtcggctgggccgccgccgggcgctacgccaggcacgtcgaa
cgcctgaagatgatgacctcgctggcctcgcccataccgtcgcaactggccgtggccgaa
tacctggtgcagggcggtttcgagcgccacctgcgccatctgcgcgaagccctcaaaacc
cagcacacggcggcccgggcgctgatcgagcgcttctttccgaagggcacccgcatgacc
gagccgcaggggggctacttcgtgtggctggaactgccgccgggcgtggacgccctggcc
ctgcaccaccaggccatggcgcagtccatcagcacggcgcccggggtgctgttctcggcc
gaccggcgcttcacgcggcacctgcgcctgaacgtcgggcacccggtcggcccgccggtc
agggccgccctgaagcggctgggcagcatggccagagagcagatcgctgcggccggcggt
tga
DBGET
integrated database retrieval system
