KEGG   Hydrogenophaga pseudoflava: HPF_09465
Entry
HPF_09465         CDS       T06073                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase 4 subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
hpse  Hydrogenophaga pseudoflava
Brite
KEGG Orthology (KO) [BR:hpse00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpse03032]
    HPF_09465 (parE)
   03036 Chromosome and associated proteins [BR:hpse03036]
    HPF_09465 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hpse02048]
    HPF_09465 (parE)
Enzymes [BR:hpse01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HPF_09465 (parE)
DNA replication proteins [BR:hpse03032]
 Prokaryotic type
  DNA Topoisomerases
   HPF_09465 (parE)
Chromosome and associated proteins [BR:hpse03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    HPF_09465 (parE)
Prokaryotic defense system [BR:hpse02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    HPF_09465 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3
Other DBs
NCBI-ProteinID: QBM27914
UniProt: A0A4P6X2P4
LinkDB
Position
1946530..1948497
AA seq 655 aa
MATQSNEYSEGSIRVLKGLEPVKQRPGMYTRTDNPLHIIQEVLDNAADEALAGFGKKIKV
TLHTDGSVSVEDDGRGIPFGLHPEEKAPVVELVFTRLHAGGKFDKGKGGAYSFSGGLHGV
GVSVTNALSTRLEVTCFRDGQVAKLAFGAGDVIEPLVVTPKGEGDRKQGTTVRAWPDARY
FDSPALPLGELTHLLRSKAVLMPGVQVTLVNEKTRDTQTWQYKGGLRDYLQQTLTTDPVI
PLFEGEGYADARDDSFADGEGAAWAVAFTEDGAPVRESYVNLIPTSAGGTHDSGLRDGLF
QAVKSFIELHALLPKGVKLLPEDVFARASYVLSAKVLDPQFQGQVKERLNSRDAVRLVGG
FVRPALELWLNQHVDYGKKLAELAIKAAQSRQKAGQKVEKRKGSGVAVLPGKLTDCESRD
TAHNELFLVEGDSAGGSAKMGRDKECQAVLPLRGKVLNTWEVERDRLFANTEIHDISVAI
GVDPHGPNDTPDLSGLRYGKVCILSDADVDGSHIQVLLLTLFFRHFPKLIEAGHVYVARP
PLFRVDVPARGKKPAAKQYALDEGELHAILDKAEKDGVNREKCQISRFKGLGEMNAEQLW
DTTLNPDTRRLLQVTLGSMDFAATEALITRLMGKGEAAARRELMELHGDSVEVDV
NT seq 1968 nt   +upstreamnt  +downstreamnt
atggcaacccaatcgaacgagtattccgaaggctccatccgcgtcctcaagggactggag
ccggtcaagcagcggccgggcatgtacacccgcaccgacaacccgctgcacatcattcaa
gaggtgctggacaacgcggccgacgaggcgctcgctgggttcggcaagaagatcaaggtc
acgctgcacaccgacgggtcggtgagcgtggaagacgacggccgcggcattcccttcggc
ctgcaccccgaagaaaaggcacccgtggtcgagctggtgttcacccgcctgcacgccggc
ggcaagttcgacaagggcaagggtggtgcttacagcttctccggcggtctgcacggggtg
ggcgtgagcgtgaccaacgcgctctcgacccgtctggaagtcacctgcttccgcgacgga
caggtggcgaaactggccttcggtgccggcgacgtgatcgagccgctggtggtgacgccc
aagggcgagggcgaccgcaagcagggcaccacggtgcgcgcctggcccgacgccaggtac
ttcgactcgcccgcgctgccgctgggcgaactgacccacctgctgcgcagcaaagcggtg
ctgatgcccggcgtgcaggtcacgctggtgaacgaaaaaaccagggacacccagacctgg
cagtacaagggcggtttgcgcgactacctgcagcagaccctgaccaccgacccggtgatc
ccgctgttcgagggcgagggctacgccgacgccagggacgacagcttcgccgatggcgaa
ggtgcggcctgggccgtggccttcaccgaagacggcgcgccagtgcgtgagagctacgtc
aacctgattcccaccagcgccggcggcacgcacgacagcggcctgcgagacggtctgttt
caggcggtcaagagcttcatcgagctgcatgcgctgctgcccaagggcgtcaagctgctg
cccgaagatgtgttcgcgcgcgccagttatgtgctgagtgccaaggtgctggacccgcag
ttccagggccaggtgaaggagcgtctgaactcgcgcgacgccgttcgcctggtcggcggt
ttcgtgcgcccggcgctggagctctggctcaaccagcatgtggactatggcaagaagctg
gccgagctggcgatcaaggccgcgcagagccgccagaaggctggccagaaggtcgagaag
cgcaagggctcgggcgtggctgtgctgcccggcaagctgaccgattgcgagagccgcgac
accgcgcacaacgaactcttcctggtggagggcgactcggccggcggcagcgccaagatg
ggtcgcgacaaggagtgccaggccgtgctcccgctgcgcggcaaggtgctcaacacctgg
gaggttgagcgcgaccgcctgttcgccaacaccgagatccacgacatctcggttgccatc
ggtgtcgatccgcacgggccgaacgacacgcccgacctgagtggcctgcgctacggcaag
gtctgcatcctgtcggacgccgatgtggacggttcgcacatccaggtgctgctgctcacc
ctgttcttccgccacttccccaagctgatcgaggctggtcatgtgtacgtggcgcgcccg
ccgctgttccgtgtggacgtgccggcgcgtggcaagaagcccgcggccaagcagtacgcg
ctggacgagggcgagctgcacgccatcctggacaaggccgagaaagacggcgtgaaccgc
gagaagtgccagatcagccgcttcaagggcctgggcgagatgaacgccgagcagctctgg
gacaccacgctcaaccccgacacccgccgcctgctgcaggtgacgctgggttcgatggac
tttgccgccaccgaggccctgatcacgcggctgatgggcaagggcgaagcggccgcgcgc
cgtgaactcatggaactccacggcgactccgtggaggtggatgtgtga

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