Hydrogenophaga pseudoflava: HPF_12110
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Entry
HPF_12110 CDS
T06073
Symbol
dapE1
Name
(GenBank) Succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
hpse
Hydrogenophaga pseudoflava
Pathway
hpse00300
Lysine biosynthesis
hpse01100
Metabolic pathways
hpse01120
Microbial metabolism in diverse environments
hpse01230
Biosynthesis of amino acids
Module
hpse_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HPF_12110 (dapE1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hpse01002
]
HPF_12110 (dapE1)
Enzymes [BR:
hpse01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
HPF_12110 (dapE1)
Peptidases and inhibitors [BR:
hpse01002
]
Metallo peptidases
Family M20
HPF_12110 (dapE1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QBM28436
UniProt:
A0A4P6X1J5
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All DBs
Position
2515504..2516676
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AA seq
390 aa
AA seq
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MTATLRLAEELIARPSVTPDDAGCLDIIAARLQTLGFACERMDSGPDAFRVANLWARCGT
GRRPTLVWAGHTDVVPTGPLDAWTSDPFVPSHRDGRLFGRGASDMKTSLAAMVVACEQFL
AATPRPAIDIAFLLTSDEEGPANDGTVVVCKELQRRGERLDWCIVGEPTSVERTGDMIKN
GRRGTMSGKLTVKGIQGHIAYPQLAKNPIHLVAPALAELAATVWDEGNAFFPPTSWQVSN
IHGGTGASNVIPGTVVIDFNFRFSTESTPEGLQGRVAEVLARHGLRPGSDYDLAWTLGGL
PFLTTPGTLVDAVRAAIQDATGIATELSTTGGTSDGRFIAQICPQVVELGPPNATIHKVD
EHVAVADIEPLTAIYRGVLERLNRSAALAG
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccacgctgcgccttgccgaagaactgatcgcccgcccctcggtcacccccgat
gacgcggggtgcctggacatcatcgcggcgcggctgcaaacgctgggctttgcatgcgag
cgcatggacagcggaccggacgccttccgcgttgccaacctgtgggcgcgctgcggcacc
ggtcggcgccccaccctcgtctgggcgggccacaccgacgtggtgcccaccggcccgctg
gacgcctggaccagcgaccctttcgtgcccagccaccgcgacggcaggctcttcggacgc
ggcgcgagcgacatgaaaacctcgctggcggcgatggtggtggcctgcgaacagttcctc
gccgccacgccgcggccggccatcgacatcgccttcctgctcaccagcgacgaggaaggc
ccggccaacgacggcacggtggtggtctgcaaggaactgcagcgacgcggtgaacggctg
gactggtgcatcgtgggcgaaccgacctcggtcgagcgcaccggcgacatgatcaagaac
ggccgccgcggcaccatgagcggcaagctcacggtcaagggcatccagggccacatcgcc
tacccgcagctggcgaagaaccctatccacctggtggcccctgcactggccgaactggcg
gccacggtctgggacgaaggcaacgccttctttccgcccaccagctggcaggtcagcaac
atccacggcggcaccggcgcgagcaacgtgattcccggcaccgtggtcatcgacttcaac
ttccgcttctccaccgagtccacgcccgaaggcctgcagggccgcgtggccgaggtgctg
gcgcggcatggtctgcggccaggcagcgactacgacctcgcgtggaccctgggcggcctg
cccttcctcaccacgccaggcaccctggtcgatgccgtgcgcgccgccatccaggacgcc
accggcatcgcgaccgagctctccaccaccggcggcaccagcgacggccggttcatcgcg
caaatctgcccgcaggtggtcgaactcggtcctcccaacgccaccatccacaaggtcgac
gagcacgtggccgtggccgacatcgagccgctcacggccatctaccgcggcgtgctcgaa
cgcctgaaccgcagcgcggcgctggccggctga
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