Hydrogenophaga pseudoflava: HPF_13055
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Entry
HPF_13055 CDS
T06073
Name
(GenBank) Long-chain-fatty-acid--CoA ligase FadD15
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hpse
Hydrogenophaga pseudoflava
Pathway
hpse00061
Fatty acid biosynthesis
hpse00071
Fatty acid degradation
hpse01100
Metabolic pathways
hpse01212
Fatty acid metabolism
hpse02024
Quorum sensing
hpse04146
Peroxisome
Module
hpse_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HPF_13055
00071 Fatty acid degradation
HPF_13055
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HPF_13055
09145 Cellular community - prokaryotes
02024 Quorum sensing
HPF_13055
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hpse01004
]
HPF_13055
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hpse04147
]
HPF_13055
Enzymes [BR:
hpse01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HPF_13055
Lipid biosynthesis proteins [BR:
hpse01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HPF_13055
Exosome [BR:
hpse04147
]
Exosomal proteins
Exosomal proteins of breast milk
HPF_13055
Exosomal proteins of breast cancer cells
HPF_13055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QBM28623
UniProt:
A0A4V1ABN9
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All DBs
Position
2725395..2727263
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AA seq
622 aa
AA seq
DB search
MIYALDAKLRDGNATLPQLLQHWAQSTPDSLAFREKDYGIWNRMTWQHYFETARRFALGL
KSLGFDKGDRLAIASEDSPEWMFADLATQAIGGVVVGIYPTNPWPELQYIVHHSNSKFVV
CGDQEQVDKVLDAMDKHATGLPDVVKIICADMKGMRGYKLDKLMSFEDVLELGDQYFASS
PENARAFDRAIEQTQPDDTCMLVYTSGTTGPPKGAMLSHRNLIVTVDKLKTHFRLDRHNY
EVVCYLPLCHVAERAFSTVLHLLTGGVVNYAESIDTVAVNLREIAPTVFLGVPRIWEKLQ
QGILIRMQDASRFQRWAFSRCMAAGQRLFERVEARGGRRSLSDRLQFFLLWLVMFRNLQK
FIGLDRMRCGFCGGASVSPEVLKFFRVLGLPVFQVYGMTESGGVVFFQHEKAARLGATGL
PIDSLNWKIADDGELIVKHPAVFKGYLHDDGATAKTVVDGWLHTGDIVALADNGELMILD
RKKAIIITSGGKNIAPSEIENALKDSLYVREAIILGDGRHFLSALIQIDYETVGKWAQER
KLAYTTYKSLALLPEVRELIDEDVKRVNKLFARVENIRKFLILEKELDHDDGELTATQKV
RRNVIEKTFSREIAIIYGGGTA
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
gtgatctacgccctggacgccaagctgcgcgacggcaacgccaccctcccccaactcttg
cagcattgggcgcagagcactccggattcgctggcctttcgagaaaaggactacggcatc
tggaaccggatgacctggcagcactatttcgaaacggcgcgccgcttcgccctgggactg
aagtccctgggcttcgacaagggcgaccggctggccatcgccagcgaggacagcccggag
tggatgttcgccgacctggccacgcaggccatcggcggcgtggtggtggggatctatccc
accaatccgtggccggaactacagtacatcgtgcatcactcgaacagcaagttcgtggtc
tgcggcgaccaggagcaggtggacaaggtgctcgatgcgatggacaagcacgcgaccggt
ttgcccgatgtggtaaagatcatctgcgccgacatgaaaggcatgcgcggctacaagctc
gacaagctgatgtcgttcgaggatgtactcgaactcggcgaccagtactttgcatcgtcg
cccgagaacgcgagagcatttgatcgtgccattgagcaaacccagcccgacgacacatgc
atgctcgtctacacctcgggaaccaccggacccccaaagggcgcaatgctctcacaccgc
aacctgatcgtcacggtggacaagctcaagacccatttcaggctggaccgtcacaactac
gaggtggtgtgctacctgccgctgtgccacgtggcggaacgcgccttctcgaccgttttg
cacctgctcactggcggcgtggtcaactacgccgaatcgatcgacaccgtcgccgtcaat
ttgcgcgagattgcgcccacggtgtttctgggcgtgccgcgcatctgggagaaattgcag
caaggcattctgatccgcatgcaggacgcctcgcgctttcaacgctgggccttctcgcgc
tgcatggcggccggacagcggctgttcgagcgcgtcgaggcacgaggaggacggcgctca
ctctccgaccggctgcagttcttcctgctctggctggtgatgtttcgcaacctgcaaaag
ttcatcggtctggaccgcatgcgctgcgggttctgcggcggcgccagcgtctcgcccgaa
gtgctgaagtttttccgcgtcctcggtcttccggtgttccaggtgtacggcatgaccgag
tccgggggggtggtcttcttccagcatgaaaaagcggccaggctgggcgccaccggactg
ccgatcgacagcctgaactggaagatcgccgacgacggcgagctgatcgtcaagcacccc
gccgtgttcaagggctatctccacgacgatggcgccaccgccaagaccgtggtcgatggc
tggctgcacaccggcgacatcgtggcactcgccgacaacggcgaactgatgatcctcgac
cgcaagaaggccatcatcatcaccagcgggggaaagaacatcgccccgtccgaaatcgag
aacgcactcaaggacagcctgtacgtgcgcgaagccatcattctgggcgacggccgccat
tttctgtccgcgctgatccagatcgactacgaaacggtgggcaagtgggcacaggagcgc
aagctggcctacaccacctacaagagcctggccttgctgcccgaggtgcgcgagctgatc
gacgaagacgtcaagcgcgtcaacaaactgtttgcgcgagtcgaaaatatccgcaagttc
ctgatcctggaaaaggaactcgaccacgatgacggtgaactcaccgccacccagaaagtg
cgccgcaacgtgatcgaaaagactttttctcgcgagatcgcgatcatttacggcggggga
actgcctga
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