KEGG   Hydrogenophaga pseudoflava: HPF_13985
Entry
HPF_13985         CDS       T06073                                 
Symbol
hsdR1
Name
(GenBank) Type-1 restriction enzyme R protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
hpse  Hydrogenophaga pseudoflava
Brite
KEGG Orthology (KO) [BR:hpse00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hpse02048]
    HPF_13985 (hsdR1)
Enzymes [BR:hpse01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HPF_13985 (hsdR1)
Prokaryotic defense system [BR:hpse02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HPF_13985 (hsdR1)
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like HSDR_N ResIII EcoEI_R_C GCIP_C TFIIB Cas_Cmr5
Other DBs
NCBI-ProteinID: QBM28806
UniProt: A0A4P6X2N0
LinkDB
Position
2924371..2927490
AA seq 1039 aa
MNDVSKPERATQHRVVQLLCKELGYRNLGDWTDRPNNAPIEETLLTAFWQTKGYTPEQMS
RALNTLRSEAANPTRTLYGNNQAVYSLLRYGVPVKTSAGEQAETVHLVDWEHPEANDFAV
AEEVTLNGGLERRPDVVLYLNGLAVGVLELKNSRVSIGHGIRQNLSNQLPEFNEGFFATV
QLVMAGNDSEGLQYGTIATQEKYFLKWKEDEADNAGYKLDKYLRKLCSKPRLLEIVHDFV
LFDAGIKKLPRVHQYFGIKAAQAHVLRRQGGIIWHTQGAGKSILMVLLARWILENLPQAR
VLIVTDRDELDEQIERVLGDAGETVYRTDSGKDLMRQLALPSPRLMCSLVHKFGGQARGK
SEAEFEQFIKDVQAAPSATYGELFVFVDECHRTQSGRLNRVMKALMPNAVFIGFTGTPLL
KEDKATSQEVFGGYIHTYKFAEAVEDKVVLDLVYEARDIDQRLGSTDQIDQWFAAKTKGL
NDWQRDELKKQWGTMQKVLSSRSRMDRVVADIVFDFATKRRLSNGRGNAMLVAASIYEAC
KYFELLQKTPFKGRCAIVTSYNPLTSHITLEETGAHTESDKQVIYNTYTELLKDVVADPH
KTKTETYEQQAKERFIKEPANMQLLVVVDKLLTGFDAPPCTYLYIDKSMQDHGLFQAICR
TNRLDGDDKDFGYIVDYKDLFKRVEKAIAVYTSELDTSAGGSDPQVMLKDRLDLARERLD
AAFEALHLLCQPVLPPQGDLDHIHYFCGNTEIPSDLQEREPQRVAMYKAVVSLIRAWANA
ADELEGAGYSPQDVDRMKAQLKHYLDLRDLVRQAAGETLDLKAYEADMRHLIDTYIEASA
PRKISPFDDIGLLDLIVKTGIAEAIANKLANVKDNHEAVAESIENNVRSKLIKEQLTDPA
FFERMSALLDEIIRLRKQKAIEYEEYLQRIATLTRQVMSGKTDDTPKQLNTPGRLALYNN
LKAWVTTNTAGQPHAPYGGNDATVAMVMALDASIKEHRPDGWRGVTAREQLVKQAIYNVI
KDIDAVNRIYPIVFAHKEY
NT seq 3120 nt   +upstreamnt  +downstreamnt
gtgaacgatgtcagcaaaccggagcgcgccacccaacaccgggtggtgcagctgctgtgc
aaagaactgggttaccgcaacctgggcgactggacggatcgcccaaataacgctccgatt
gaagaaaccctgctcaccgccttctggcagaccaagggttacacacccgagcagatgagc
cgggcactgaacacgctgcgcagcgaggccgccaaccccacccgcacgctgtacggcaac
aaccaggcggtgtacagcctgctgcgctacggcgtgccagtgaaaaccagcgcgggcgaa
caggccgagacggtgcacctggtggactgggagcaccccgaagccaatgactttgcggtg
gccgaagaagtgacgctgaacggcggcctggagcgccgacccgacgtcgtgctgtacctg
aacgggctggccgtgggcgtgctggagctgaagaacagccgggtgagcattggccacggc
atccgccagaacctgtccaaccaactacccgagttcaacgagggcttctttgccacggtg
cagctggtgatggcgggcaacgacagcgagggcctgcagtacggcaccattgccacacaa
gaaaagtacttcctgaagtggaaagaagacgaggccgacaacgcaggttacaagctcgac
aagtacctgcgcaagctgtgcagcaagccgcggctgctggagatcgtgcacgacttcgtg
ctgttcgacgccggcatcaagaagctgccacgggtgcaccagtactttggcatcaaggcg
gcgcaggcgcatgtgttgaggcgccagggcggcatcatctggcacacgcagggcgcgggc
aaaagcatcttgatggtgctgctggcgcgctggattctggagaacctgccgcaggcgcgc
gtgctgatcgtgaccgaccgggacgagctggacgagcagatcgagcgcgtgctgggcgac
gcgggcgaaacggtgtaccgcaccgacagcggcaaggacctgatgcgccagctggccctg
ccctcgccccggctgatgtgttcgctggtgcacaagtttggcggccaggcgcgcggcaag
agtgaggcggagttcgagcagttcatcaaggacgtgcaggctgcacccagcgccacctac
ggcgagctgtttgtgtttgtggacgagtgccaccgcacgcagagcggccggctgaaccgg
gtgatgaaggcgctgatgcccaacgcggtgttcattggcttcaccggcaccccactgctc
aaggaagacaaggccaccagccaggaggtgtttggcggctacatccacacctacaagttc
gccgaagcggtggaagacaaggtggtgctggacctggtgtacgaggcgcgcgacattgac
cagcggctgggctcgaccgaccagatcgaccagtggtttgccgccaagaccaagggcctg
aacgactggcagcgcgacgaactgaagaagcaatggggcaccatgcagaaggtgctgagt
tcccgctcgcgcatggaccgggtggtggccgacatcgtgttcgacttcgcgaccaagcgc
cgcctgtccaacgggcgcggcaacgccatgctggtggcggccagcatctacgaggcctgc
aagtatttcgaactgctgcagaagacgccgttcaaggggcgctgcgccatcgtcacgtcg
tacaacccgctgaccagccacatcacgctggaagaaacaggcgcccacaccgagagcgac
aagcaggtcatctacaacacctacaccgagctgctcaaggacgtggtggccgatccccac
aaaaccaagacagaaacctacgagcagcaggccaaagaacgcttcatcaaggagccggcc
aatatgcaactgctggtggtggtggacaagttgctgaccggctttgacgccccaccctgc
acctacctctacatcgacaagtcgatgcaggaccatggcctgttccaggccatctgccgc
accaaccggctggacggtgacgacaaggactttggctacatcgtggactacaaagacctg
ttcaaacgggtggagaaagcgatcgcggtttacacctcggagctggacaccagcgcgggc
ggcagcgacccgcaggtgatgctcaaggaccggctggacctggcccgtgagcggctggat
gcggcgttcgaggccctgcacctgctctgccaaccggtgttaccaccgcagggcgacctg
gaccacatccactacttctgcggcaacaccgagatcccttcggacctgcaggagcgggaa
ccacaacgtgtggcgatgtacaaggccgtggtatccctgatccgcgcctgggccaacgcg
gccgacgaactggagggcgctggctactcgccccaggatgtggaccgcatgaaggcgcag
ctgaagcactacctggacctgcgcgacctggtgcgacaagcagcgggcgaaacgctggac
ctcaaggcctacgaggccgacatgcgccacctgatcgacacctacatcgaagcctcggca
ccgcgcaagatttcgccgtttgacgacatcggcctgctggacctgatcgtcaagaccggc
attgcagaggccatcgccaacaagctggcgaacgtcaaggacaaccacgaggccgtggcc
gagagcatcgagaacaacgtccgcagcaagctcatcaaggagcagttgaccgatccggcg
ttctttgagcgcatgtcggccctgctggacgagatcatccggctgcgcaagcagaaagcc
atcgagtacgaggaatatctgcagcgcatcgccaccctgacccgacaggtcatgagcggc
aagacggacgacaccccgaaacagctgaacaccccgggccgcctggcgctgtacaacaac
ctcaaggcctgggtgaccaccaacacggccggtcagccacacgcaccctatggcggcaac
gacgctacggtggccatggtgatggcgctggacgcgtctatcaaggaacaccgacctgac
ggctggcgcggcgtgacggcccgggagcaactcgtcaaacaggcgatctacaacgtgatc
aaagacatcgacgcggtgaaccgcatctaccccatcgtgttcgcccacaaggaatactga

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