Hydrogenophaga pseudoflava: HPF_14605
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Entry
HPF_14605 CDS
T06073
Symbol
rlmE
Name
(GenBank) Ribosomal RNA large subunit methyltransferase E
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
hpse
Hydrogenophaga pseudoflava
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpse03009
]
HPF_14605 (rlmE)
Enzymes [BR:
hpse01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
HPF_14605 (rlmE)
Ribosome biogenesis [BR:
hpse03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HPF_14605 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Motif
Other DBs
NCBI-ProteinID:
QBM28929
UniProt:
A0A4P6X1I4
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All DBs
Position
complement(3063078..3063755)
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AA seq
225 aa
AA seq
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MGMKVKTQSKKVNKAWLNEHVNDPYVRLAQKEGYRARAAYKLKEIDETLGLIRPGDVVVD
LGSAPGAWSQYVRRRLSPGGAAVGELHGQIIALDLLPMEPVEGVHFIQGDFRESEVLAAL
EQALADRGVKAVDVVVSDMAPNLSGIGSADAARIEDLVGLAVDFASQHLKPDGALVAKLF
HGGAYDPLVALFRKTFKVVKPFKPKASRDKSSETFLVGMGLKSPN
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgggcatgaaagtcaagactcagagcaagaaggtcaacaaggcgtggctgaacgagcac
gtcaacgatccgtatgtgcgtctggcccagaaagagggttaccgggcacgggcggcctac
aagctcaaggagatcgacgaaaccctggggcttatacgcccgggtgacgtggtggtcgat
ctgggttcggcgcccggcgcctggagccagtatgtgcgccggcgcctgagcccgggtggc
gccgctgtcggcgagttgcacggacagatcatcgcgctggacctgctgcccatggagccc
gtcgaaggcgtgcacttcatccagggcgactttcgcgagagcgaagtactggccgcgctg
gagcaggcactggccgaccgtggggtgaaggcagtcgatgtcgtggtgtccgacatggcg
ccgaatctctcgggcatcgggtcggcagacgccgcgcgcatcgaggatctggtgggcctt
gcggtggacttcgccagtcagcacctcaagcccgatggtgccttggtggccaagctgttt
cacggtggggcctacgaccctctggtggccctgttccgaaagaccttcaaggttgtcaaa
cctttcaagcccaaggcgtcgagggacaaatcctctgaaacctttttggtgggcatgggt
ctcaaaagcccgaactga
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