Hydrogenophaga pseudoflava: HPF_15535
Help
Entry
HPF_15535 CDS
T06073
Name
(GenBank) Integrase core domain protein
Organism
hpse
Hydrogenophaga pseudoflava
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
HTH_23
Sf6_terminase
HTH_Tnp_Tc3_1
Sigma70_r4_2
HTH_28
HTH_26
HTH_3
HTH_29
HTH_7
HTH_IclR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QBM29108
UniProt:
A0A4P6X3J3
LinkDB
All DBs
Position
complement(3253152..3254672)
Genome browser
AA seq
506 aa
AA seq
DB search
MDMIGKVRRMKMRDGISISEISRKTGLARNTVKKWLKAPAAMEPRYERAQKMGKLSAFEA
TLVAALKTDAHRARDQRRTARALFVQIQAQGYRGGYSAVTDFIRAWRQDSGKDTTKAFVP
LSFELGEAFQFDWSEEGIVVGGVYHQAQVAHLKLCASRAFWLVAYPSQGHEMLFDAHTRS
FAALGGVARRGIYDNMKTAVDKVKKGKGRVVNARFAAMCSHYLFDADFCNVASGWEKGVV
EKNVQDSRRRVWLQARERKFTSFAELNAWLAERCKAVWADTPHPQHRELSIAEVLQLECE
HLMGMPAPFDGYVERPARVSSTCLVTVARNRYSVPCEWAGHMVSTRLYPGRVDVVAGDAL
VASHERVLNRGQTVFDWQHYIELVQRKPGALRNGAPFADMPRPLAQLRHALMRHTGGDRV
LSEVLALVPTAGLDTLLVAVELVLEHATPSGHISVEHVRNVLARLSDPQRPPPADTALAL
REAPRADTHRYDRLRAADAQEAGHAN
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggacatgattggcaaggtcaggcgcatgaagatgcgcgatgggatttcgatcagcgag
atctcgaggaagacgggtttggccaggaacaccgtcaagaagtggctgaaggcgccggcg
gcgatggagccgcggtatgagcgggcgcagaagatgggcaagctctcggcgttcgaggcg
acgctggtggcggcgctcaagacggatgcccaccgagctcgggatcagcggcgcacggcg
cgggcgctgtttgtgcagatccaggctcaaggctaccggggcggctacagcgcggtgacg
gacttcatccgggcgtggcgacaggactcgggcaaggacaccacgaaggcgtttgtgccg
ctgagcttcgagctgggcgaggcgttccagtttgactggagcgaggaaggcatcgtggtg
ggcggggtgtaccaccaggcgcaggtggcgcacctgaagctgtgcgcctcgcgcgcgttc
tggctggtggcgtaccccagccaggggcacgagatgctgtttgacgcgcacacgaggtcg
tttgcggcgctcggcggcgtggcccgccggggcatctacgacaacatgaagacggcggtg
gacaaggtcaagaagggcaagggccgggtggtcaacgcccggtttgcggccatgtgcagc
cactacctgtttgatgcggacttctgcaacgtggcctcgggctgggagaagggggtggtg
gagaagaacgtgcaggacagccggcgacgggtgtggctgcaagcgcgagagcgcaagttc
accagctttgccgaactcaacgcgtggctggccgagcgctgcaaggcggtgtgggcggac
acgccgcacccgcagcaccgggagctgagcattgccgaggtgctgcagctcgagtgcgag
cacctcatgggcatgccagcgccgtttgacggctacgtggagcgccccgcgcgggtcagc
agcacctgcctggtgacggtggcgcgcaaccgctactcggtgccctgcgagtgggccggg
cacatggtgagcacgcggctgtatcccggccgcgtggacgtggtcgctggggacgcgctg
gtggccagccacgagcgggtgctcaaccgggggcagacggtgttcgactggcagcactac
atcgagctggtgcagcgcaagcccggggcactgaggaacggcgcaccgtttgccgatatg
ccccggccgctggcgcaactgcgtcatgccctgatgcgccacaccggtggtgaccgggtg
ctctcggaggtgctggccctggtgcctacggcagggttggacacgctgctggtggcggtg
gaactggtgctggaacacgccacgcccagcggacacatcagcgtggagcacgtgcgcaac
gtgctggcgcgcctgagtgatccgcagcgtccgccaccggcggacacggccctggcgctg
cgcgaggcgccacgcgccgacacccaccgctacgaccggctgcgcgctgccgacgcccag
gaggctggccatgcgaactga
DBGET
integrated database retrieval system
