Hydrogenophaga pseudoflava: HPF_16065
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Entry
HPF_16065 CDS
T06073
Name
(GenBank) L,D-transpeptidase catalytic domain
KO
K19234
L,D-transpeptidase YnhG
Organism
hpse
Hydrogenophaga pseudoflava
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hpse01002
]
HPF_16065
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpse01011
]
HPF_16065
Peptidases and inhibitors [BR:
hpse01002
]
Cysteine peptidases
Family C82
HPF_16065
Peptidoglycan biosynthesis and degradation proteins [BR:
hpse01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HPF_16065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Cds6_C
TPR_14
TPR_16
Motif
Other DBs
NCBI-ProteinID:
QBM29208
UniProt:
A0A4P6X3T4
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All DBs
Position
3367899..3369143
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AA seq
414 aa
AA seq
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MARMHDASDAIKSVTRPSGLRPQPLSDDAMARVAPLLGRAEARLIDIYRLISQGQHREAL
SQADRLVRDHPNFHLAHLVHGDLLSLQVRPVRQLGDVPDTTAIAAAQQLAVLRDESRRRL
RALTERPPEGAIPSQFLSLSSQSRHAIAVDASRSRLYLFENQTPSGGTNGLLATPPRLKL
LGDFYISVGLSGIEKEVEGDKRTPLGVYYITSNLHPDSLPDLYGVGALPINYPNPLDLQR
GKTGSGIWLHGTPREQFVRAPQASDGCVVLSNPDLERLLATVQIRTTPVVIAPELQWVQP
EELEAERLAFESALASWKEAKSAGQSERLSAFYSSKLLAGSGSGGGRPEAGPDSAKGVRA
VDIKDVSVLRWQDQQETMVVTFGEVPQGQSRGVTRRQYWARESDQWKIFHEGTP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcccggatgcacgacgcgtccgatgccatcaagtcggtgaccaggccctccggcctg
cgaccacaaccgttgtcggacgacgccatggcccgcgtcgcccctttgttgggtcgggcc
gaggccaggctgatcgatatctaccgtctcatcagccagggccagcaccgcgaggcgctg
tcacaagccgatcgcctggtccgcgatcaccccaacttccacctcgctcacctcgtgcac
ggagacctgctgagcctgcaggtccggccggtccgccagctgggtgacgtgcccgacacc
accgctattgcagcggcgcagcagctcgccgttcttcgggacgagtcgcgccgacgccta
cgtgcgttgaccgaaagaccacccgaaggagccattccttcccagttcctgagcctctcc
tcccagagcaggcatgcgatcgccgtcgacgcgtcccggtcacgcctgtacctgttcgag
aaccagacgccgtccggcggtacgaacggcttgctggcgacccctcccaggctcaagctg
ctgggcgacttctacatctcggtcggcttgtcgggtatcgagaaagaggtcgaaggcgac
aagcgcacacctctgggcgtctactacatcaccagcaatctgcaccccgacagcctgccc
gacctctatggcgtcggtgcgctgcccatcaactacccgaacccgctggacctgcagcgc
ggcaagaccggtagcggcatctggctgcatggaacaccgcgcgagcagtttgtccgggcg
ccacaagcgtcggacggctgcgtggtgctgtccaacccggatctcgaacgactgctggcc
accgtgcagatccgcaccacgccggtggtgatcgcccccgaactccaatgggtgcaaccg
gaggaactcgaagccgaacggcttgcgttcgaaagcgcactggcctcctggaaagaagcc
aagagcgcgggccagagcgaacgcctgagcgcgttctactccagcaagttgctcgccggg
agcgggtccggcggcggccgaccggaggctggtccagactccgccaaaggcgtgagagca
gtcgacatcaaggatgtttccgtgctccgctggcaggaccagcaggaaacgatggtggtc
accttcggagaggtgccacaaggtcagagccgaggggtgacccggcgccagtactgggct
cgtgaaagcgaccagtggaagatttttcatgaagggactccctga
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