Hydrogenophaga pseudoflava: HPF_16440
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Entry
HPF_16440 CDS
T06073
Symbol
gabD
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
hpse
Hydrogenophaga pseudoflava
Pathway
hpse00250
Alanine, aspartate and glutamate metabolism
hpse00310
Lysine degradation
hpse00350
Tyrosine metabolism
hpse00650
Butanoate metabolism
hpse00760
Nicotinate and nicotinamide metabolism
hpse01100
Metabolic pathways
hpse01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
HPF_16440 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HPF_16440 (gabD)
00310 Lysine degradation
HPF_16440 (gabD)
00350 Tyrosine metabolism
HPF_16440 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
HPF_16440 (gabD)
Enzymes [BR:
hpse01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
HPF_16440 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
HPF_16440 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
HPF_16440 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
QBM29283
UniProt:
A0A4V1ABV5
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Position
3446442..3447920
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AA seq
492 aa
AA seq
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MDMKTSPLALLKDPTLLKTDGLINGEWVQGASRFDVLDPATGLKLADVANLGPADAERAI
AAANAAWAGWKNKTAKERSIILRKWYDLLMANQDDLGRLMTAEQGKPLPEAKGEVAYGAS
FVEWFAEEAKRVNGETLPQFDNNRRLMVLKQPIGVCAAITPWNFPLAMITRKVAPALAAG
CPVVIKPAELTPLTALAAAELAIRAGIPAGVLNILTADDQNSIAVGKVLCASDVVRHISF
TGSTEVGRILMAQSAPTVKKMSLELGGNAPFIVFDDADIDSAVEGAFASKYRNAGQTCVC
SNRLYVQEGVYEQFVEKFAAKVKTAKVGNGFEDGVNQGPLIEEAALQKVERHVADAQAKG
GRVLVGGKRLDGQFFEPTVVADATADMLCAREETFGPFAPVFKFKTEQEAIDAANNTEFG
LASYFYSRDIGRITRVSEALEYGMVGVNVGILATEHVPFGGVKQSGLGREGSHYGMDDYV
EIKYVCIGDVLK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggacatgaaaacctcccccctggccctgctcaaggacccgaccctgctcaagaccgac
ggcctgatcaacggcgaatgggtccagggcgccagccgcttcgacgtgctcgacccggcc
acgggtctgaagctggccgacgtcgccaacctcggcccggctgatgccgagcgtgccatc
gccgccgccaacgccgcctgggccggctggaagaacaagaccgccaaggagcgcagcatc
atcctgcgcaagtggtacgacctgctgatggccaaccaggacgacctgggccgcctgatg
accgcagaacagggcaagcccctgcccgaagcaaagggcgaagtcgcctacggtgccagc
tttgtcgagtggtttgccgaagaggccaagcgcgtcaacggcgagaccctgccgcagttc
gacaacaaccgccgcctgatggtgctcaagcagcccatcggcgtctgcgccgccatcacg
ccctggaacttccctctggccatgatcacccgcaaggtcgcgcctgcgctggccgccggc
tgcccggtggtcatcaagcccgccgagctgacgccgctgaccgcgctggccgccgccgag
ctggccatccgcgccggcatcccggccggcgtgctgaacatcctcaccgccgacgaccag
aactcgatcgccgtgggcaaggtgctgtgcgcctccgacgtggtgcgccacatcagcttc
accggctccaccgaagtcggccgcatcctgatggcgcagagcgctcccacggtcaagaag
atgtcgctggaactgggcggcaacgcgcccttcatcgtgttcgacgacgccgacatcgac
tccgccgtcgaaggggcgtttgccagcaagtaccgcaacgccggccagacctgcgtgtgc
tccaaccgcctgtacgtgcaggaaggtgtgtacgagcagtttgtcgagaagttcgccgcc
aaggtgaagaccgccaaggtcggcaacggctttgaagatggcgtgaaccagggcccgctg
atcgaggaagccgcactgcagaaggtggaacgccacgtcgccgacgcacaggccaagggc
ggccgcgtgctggtgggcggcaagcgcctggacggccagttcttcgaacccacggtggtg
gccgacgccacggccgacatgctgtgcgcccgcgaagagaccttcggccccttcgcgccg
gtgttcaagttcaagaccgagcaggaagccatcgacgccgcgaacaacaccgagttcggc
ctggccagctacttctacagccgcgacatcggccgcatcacccgcgtgagcgaagcgctg
gagtacggcatggtgggcgtgaacgtcggcatcctggcgaccgagcacgtgcctttcggt
ggcgtcaagcagtccggcctgggccgcgaaggctcgcactacggcatggacgactacgtc
gagatcaagtacgtctgcatcggcgacgtgcttaagtga
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