Hydrogenophaga pseudoflava: HPF_16605
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Entry
HPF_16605 CDS
T06073
Name
(GenBank) Deoxyribodipyrimidine photo-lyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
hpse
Hydrogenophaga pseudoflava
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpse03400
]
HPF_16605
Enzymes [BR:
hpse01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
HPF_16605
DNA repair and recombination proteins [BR:
hpse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
HPF_16605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
QBM29315
UniProt:
A0A4P6X384
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All DBs
Position
3483508..3484695
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AA seq
395 aa
AA seq
DB search
MAAQAGLPLELRDDTHFFSTVREFAAHAKGRQQLRLEYWYRALRQKHGVLMDGKQPAGGQ
WNFDADNRESFGKTGPQNVPAPFFVEPDAITREVIELVNLRFADHPGSLDSFAWPVTRAD
ALRALDNFIEQRLPLFGQFEDAMWVGEVWLWHSQLSAALNLKLLNPREVVAAAEAAYRNG
HAPLAAVEGFVRQILGWREYVRGIYWTQMPGYLERNALEAQAPLPAWYWTGETEMACLRE
AVTQTLAHGYAHHIQRLMVTGLYTLLLGVRPQAVHAWYLSVYVDAVDWVELPNTLGMSQY
GDGGLLGSKPYVATGRYIQRMSNHCSGCRYDPAQSTGPKACPFTTLYWDFLMRHEPVLRR
NPRMAMQMKNLDRLAPEVRSAITEQARTHRSAQTG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
gtggcggcgcaggctggcctgccgctggagctgcgcgacgacacgcacttcttttccacc
gtgcgcgagttcgccgcgcacgccaagggccgccagcagctgcgcctcgaatactggtac
cgcgcgctgcggcagaaacacggcgtgctgatggacggcaaacagccggcgggcggccag
tggaacttcgacgccgacaaccgggagagcttcggcaagaccggcccgcagaatgtgccg
gcgccgttctttgttgagcccgatgcgatcacgcgcgaggtgatcgaactggtcaacctg
cgcttcgccgaccacccgggatcactggacagctttgcctggcccgtcacccgcgccgac
gccctgcgcgcgctggacaacttcattgagcagcgcctgccgctgttcggacagtttgaa
gacgcgatgtgggtcggcgaggtctggctctggcattcgcagctgagcgccgcgctcaac
ctcaaactgctgaacccgcgcgaggttgtggccgcggccgaagcggcgtaccgcaacggc
cacgcaccgctggccgcggtggaaggcttcgtccgccagatactgggctggcgcgagtac
gtgcgcggcatctactggacgcagatgcccggctacctggaacgcaacgcgctggaggcg
caggcgccgctgcccgcctggtactggaccggcgagaccgagatggcctgcctgcgcgag
gccgtcacgcagacgctggcgcacggctacgcgcaccacatccagcgcctcatggtcacg
ggtctgtacaccctgctgctgggcgtgcggccgcaggccgtccacgcgtggtacctgagc
gtgtacgtggacgcggtggattgggtggagctgcccaacaccctgggcatgagccagtac
ggcgacggcggcctgctgggcagcaagccctatgtggccacgggcaggtacatccagcgc
atgagcaaccactgcagcggctgccgctacgacccggcccagagcaccggacccaaggcc
tgccccttcaccacgctgtactgggactttctgatgcggcacgagccggtgctgcggcgg
aacccgcgcatggccatgcagatgaagaacctggaccggcttgcgcccgaggtccggtcg
gccatcaccgagcaggcccggacccaccgctcggcgcagaccggctga
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