Hydrogenophaga pseudoflava: HPF_16770
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Entry
HPF_16770 CDS
T06073
Name
(GenBank) putative HTH-type transcriptional regulator
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
hpse
Hydrogenophaga pseudoflava
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hpse03000
]
HPF_16770
03036 Chromosome and associated proteins [BR:
hpse03036
]
HPF_16770
Transcription factors [BR:
hpse03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HPF_16770
Chromosome and associated proteins [BR:
hpse03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
HPF_16770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_AsnC-type
P22_Cro
Motif
Other DBs
NCBI-ProteinID:
QBM29348
UniProt:
A0A4P6X467
LinkDB
All DBs
Position
complement(3517808..3518704)
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AA seq
298 aa
AA seq
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MLDYAALNALAAVVREGSFDRAARALHVTPSAISQRIRLLEERVGCALVVRGQPCRPTDT
GRRMCQHVDRVRLLEAELTDALPAIAPEGGARVHLPVAVNADSLATWFAPALAAFAAEAP
VLVELSVDDQDHTAEWLRTGAVVAAVTGTARPATGCNSQPLGVMRYLAAASPAFVAQHFA
QGVGAGSLAQAPSLLFNTKDELQAGWVRRLCHRHVELPRHTLPSSHAFVTAALAGMGWGM
FPQGMIEPHLAEGTLVELAPGTPLDVPLYWQTARAASGLLDGLTRRMVAAAREALRPG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgctcgattacgccgccctcaacgccctggccgccgtggtgcgcgaaggcagcttcgac
cgcgcggcgcgcgcgctgcacgtcaccccgtcggcgatctcgcagcgcatccgcctgctg
gaggagcgcgtgggctgcgcgctggtggtacgcggccagccctgccggcccacggacacc
ggacgccgcatgtgccagcacgtggaccgcgtgcgcctgctggaggcggaactgaccgac
gcgctgcccgccatcgcgcccgagggcggggcgcgggtccacctgccggtggccgtcaac
gccgacagcctggccacctggttcgcgcccgcgctggcggcgttcgcggccgaggcgccg
gtgctggtggagctgagcgtggacgaccaggaccacacggccgaatggctgcgcaccggc
gcggtggtggccgccgtcaccggcaccgcgcggccggccaccggctgcaacagccagccg
ctgggcgtgatgcgctacctggccgccgccagcccggcgttcgtggcacagcactttgcg
cagggggtgggcgcaggcagcctggcccaggcgcccagcctgctgttcaacaccaaggac
gagctgcaggccggctgggtgcggcgcctgtgccaccgccatgtggaactgccgcggcac
acgttgccctcgtcgcacgccttcgtcaccgccgcgctggccggcatgggctggggcatg
ttcccgcagggcatgatcgagccccacctggccgagggcacgctggtggagctggcgccc
ggcacgccgctggatgtgccgctgtactggcagacggcgcgggcggcatccggcctgctc
gacgggctgacccggcggatggtggccgccgcgcgggaggccctgcggcccgggtga
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