Hydrogenophaga pseudoflava: HPF_17835
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Entry
HPF_17835 CDS
T06073
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
hpse
Hydrogenophaga pseudoflava
Pathway
hpse00521
Streptomycin biosynthesis
hpse00523
Polyketide sugar unit biosynthesis
hpse00525
Acarbose and validamycin biosynthesis
hpse00541
Biosynthesis of various nucleotide sugars
hpse01055
Biosynthesis of vancomycin group antibiotics
hpse01100
Metabolic pathways
hpse01110
Biosynthesis of secondary metabolites
hpse01250
Biosynthesis of nucleotide sugars
Module
hpse_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HPF_17835 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HPF_17835 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HPF_17835 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HPF_17835 (rfbB)
00525 Acarbose and validamycin biosynthesis
HPF_17835 (rfbB)
Enzymes [BR:
hpse01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HPF_17835 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
Motif
Other DBs
NCBI-ProteinID:
QBM29561
UniProt:
A0A4P6X715
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All DBs
Position
3730527..3731591
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AA seq
354 aa
AA seq
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MILVTGAAGFIGANFVLDWVAQSQEPVVNLDKLTYAGNPENLASLQGNPGHIFVQGDIGD
RSLVDRLLAEHKPRAVVNFAAESHVDRSIHGPEDFIQTNVVGTFHLLESVRAYWGSLEGE
ARAAFRFLHVSTDEVYGTLGPNDAPFTETTPYTPNSPYSASKAASDHLVRAYHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLMIVNALAGKPLPVYGDGMQVRDWLFVKDHCSAIRRVLEA
GATGETYNVGGWNEKPNIEIVKTVCALLDDLRPRADGQSYATQITYVKDRPGHDRRYAID
ATKIHRELGWKPAETFDTGIRKTVQWYLDHPDWVAHVQSGDYRNWIGQQYGALA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgattctggttaccggcgccgcaggctttattggcgcgaacttcgtgctcgactgggtc
gcacagtcccaggaacccgtcgtgaatctggacaagctgacctatgccggcaaccccgag
aacctggccagcctgcagggcaaccccggacacatcttcgttcagggtgacatcggcgat
cgctcccttgttgaccgcctgctggccgaacacaagcccagggcagtggtgaacttcgct
gcagaaagccacgtcgaccgatccattcacggaccggaggacttcatccagaccaacgtc
gtcggcaccttccacctgctggagtctgtgcgtgcgtattggggttctcttgaaggtgaa
gccagggctgctttccggttcctgcacgtctcgaccgacgaggtctacggcacgctcggc
ccgaacgatgctccgttcaccgagaccacaccctacacgcccaacagcccctactcggcc
tccaaggcggccagcgaccacctggtgcgcgcctaccaccacacctacggtctgccggtg
ctgaccaccaactgttcgaacaattacggtccctaccacttccccgagaagctgatcccg
ctgatgatcgtcaacgccctggccggcaagccactgccggtctacggcgacggcatgcag
gtgcgcgactggttgttcgtcaaggaccactgcagtgcgatccgccgcgtgctcgaagcc
ggagcgactggtgaaacctacaacgtgggcggctggaacgaaaagccgaacatcgagatc
gtcaagacggtctgcgcgttgctggacgatctgcgcccccgtgccgacggccagtcctat
gccacgcagatcacctacgtgaaggaccggccgggccacgaccgccgctacgccatcgac
gcaaccaagattcaccgcgaactgggctggaagcctgccgaaaccttcgacaccggcatc
cgcaagaccgtgcagtggtacctggaccatcccgactgggtggcgcacgtgcaaagcggc
gactaccggaactggatcggccagcagtacggagcgcttgcatga
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