Hydrogenophaga pseudoflava: HPF_18185
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Entry
HPF_18185 CDS
T06073
Symbol
alkA2
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
hpse
Hydrogenophaga pseudoflava
Pathway
hpse03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPF_18185 (alkA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hpse03000
]
HPF_18185 (alkA2)
03400 DNA repair and recombination proteins [BR:
hpse03400
]
HPF_18185 (alkA2)
Enzymes [BR:
hpse01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
HPF_18185 (alkA2)
Transcription factors [BR:
hpse03000
]
Prokaryotic type
Helix-turn-helix
AraC family
HPF_18185 (alkA2)
DNA repair and recombination proteins [BR:
hpse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPF_18185 (alkA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
QBM29631
UniProt:
A0A4P6X792
LinkDB
All DBs
Position
3806090..3807616
Genome browser
AA seq
508 aa
AA seq
DB search
MPAMNRPAPLDADALYRALGARDARFDGRFFTGVTSTGIYCRPICRVRTPKRDNCQFFEH
AAQAEQAGFRPCLRCRPELAPRDRHWSTEDAGDILIRQATALLDTPETWNTGANEPPLEQ
LAARLGVSGRHIRRLFENRLGVSPLQYLQTRRLLAAKQMLADTDLPVAQVALAAGFSSLR
RFNDAFVGRYGLNPTQLRRSRSTDSPNAPRAPAEVRLSWRPPYRVQDVLRFFADRALPGL
EAVDTVQENLVRTLRLSVRGTVACGWMLIRFLPDEHRIGLRVSEGLLPALPAVIDRVRAA
LDLDADPLAIDSVLHPDFPHSDGMRVPGTFDGFELAVRAVLGQQVTVAAARTLCGRLVDR
LGTPLTDGPPGLQRLFPTPEALAEVEGQVLGEIGIVRQRQQAILALARAVADGHLVLDGR
ADPASTLKSLEALPGIGPWTAQYIAMRALRWPDAWPSGDVVLLQALGLRGLPAAAARREA
DRIARRWQPWRSYAVIRAWATPPMFPRS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgccagccatgaaccgccctgccccgctcgacgccgacgccctctaccgggcgctgggc
gcgcgcgacgcccgttttgacgggcgcttcttcaccggcgtcacctccaccggcatctac
tgccgcccgatctgccgggtccgcacccccaagcgagacaactgccagttctttgaacac
gccgcccaggccgaacaggccggcttccgcccctgcctgcgctgccggccggagctggcg
ccgcgcgaccgccactggtcgaccgaggacgccggggacatcctgatccgccaggccacc
gccctgctcgacacgccggagacctggaacacaggcgcgaatgaaccaccgctggagcag
ctggcggctcggctgggagtgagcggacgtcacatccgccgcctgttcgaaaaccgactg
ggcgtctcgcccctgcagtacctgcagacgcggcgcctgctcgccgccaaacagatgctg
gccgacaccgacctgccggtggcccaggtggcccttgccgccggattcagcagcctgcgc
cgcttcaacgacgcgttcgtgggccgctacggcctcaatccgacccagttgcggcgcagc
cggtccaccgactcgcccaacgccccgcgggcgccggccgaggtgcgactctcctggcgg
ccgccctaccgggtgcaggacgtgctgcgcttcttcgccgaccgtgccctgccgggactc
gaggcagtcgacacggtgcaagagaacctggtgcgaacgctgcgcctctcggtgcgcggc
acggttgcgtgcggctggatgctcatccgattccttccggacgagcaccgcatcggtctg
cgggtcagcgagggcctgctgccggcactgcccgcggtcatcgaccgagtgcgcgcggcc
ctggacctggacgccgacccgctggccatcgacagcgtgctgcaccctgatttcccccac
agcgacggcatgcgcgtgcccggcaccttcgacggcttcgaactggcggtgagggctgtg
ctgggtcagcaggtgacggtggctgcggcacgcaccctgtgtggccgcctggtggaccgg
ctgggcacaccgttgaccgacggtccaccgggtctgcagcgcctgttccccacgcccgag
gcgctcgccgaggtcgaagggcaggtgctgggcgagatcgggatcgtgcgccagcgccag
caggcgatcctagcgctggcgcgcgcagtggcggacggccacctggtgctcgacggtcgt
gccgacccggcatcgaccctgaagagcctcgaggccctgcccggcatcggcccctggaca
gcccaatacatcgcaatgcgggccctgcgttggcccgacgcctggcccagcggcgacgtc
gtgctcctgcaggcgctgggtctgcggggcctgcccgccgccgcggcacgccgggaagcc
gatcgcatcgcccggcgctggcagccctggcgcagctacgccgtgatacgcgcctgggcc
acacccccaatgtttccacgctcctga
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