Hydrogenophaga pseudoflava: HPF_18390
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Entry
HPF_18390 CDS
T06073
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
hpse
Hydrogenophaga pseudoflava
Pathway
hpse03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HPF_18390 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpse03400
]
HPF_18390 (mutS)
DNA repair and recombination proteins [BR:
hpse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HPF_18390 (mutS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_II
MutS_C
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QBM29668
UniProt:
A0A4P6X559
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Position
3851572..3854202
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AA seq
876 aa
AA seq
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MTAPLDRHTPMMQQYLALKAGHPDTLLFYRMGDFYEMFYADAEKAARLLDITLTQRGQSA
GEPVIMAGVPFHSVESYLARLIKLGESVAICEQVGDVATAKGPVERKVVRVVTPGTLTDT
ELLSDKTEALVMAVHPGARTGLGLAWLSVTQGIVFLAQCASDELADWIARVGPGEVLYSA
EVTPAFEKSLQQISAQPLPSGARCVAVVRPAWAFDAGLGERKLLEQLQAASLGAWDAQDL
KDAHAAAAALLAYAEHTQGRALTHIRSLQVARSGELIDLPVNTRRNLELTHTLRGETSPT
LFSLLDTCHTGMGSRALRHWLLSPRRERTEARERLAAIDRLRGGLWQTLRVELKGSSDVE
RITARTALRQVRPRELVGLTATLGRSLQLSKALATGLGATPPALLQRIAADLTPPAGCAE
LLAQAIAPEPAALVRDGGVIADGFDAELDELRAIQTNCDGFLIDLETRERARTGIANLRV
QFNKVHGFYIEVTQGQLDKVPDDYRRRQTLKNAERFITPELKAFEDKALSAQDRALAREK
YLYELLLDEMQSWIDPLTKLARAMAALDALCALAERSLTLNWAEPTFAPEPCIEIRGGRH
PVVEARLNETTGGSFIANDTVLGGKQRMQVITGPNMGGKSTYMRQVAVIVLLASMGSYVP
AASCRLGPIDAIHTRIGAADDLANAQSTFMVEMTEAAQILHAATPESLVLMDEIGRGTST
FDGLALAGGIAAHLHDKARCFTLFATHYFELTEFPATHHGAVNVHVSAVEGGGKSGIVFL
HQIEPGPASRSYGIQVARLAGVPGAVVQHAKHALAALEAHSESSRVQVDLFAPPPAPPEP
ETPPVLAALATIDPDALSPREALDQLYALKKLATKP
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgccccgctggaccgccacacccccatgatgcagcagtacctggccctcaaggcc
gggcaccccgacacgctgctgttctaccgcatgggcgacttctacgagatgttctacgcc
gatgcggaaaaggccgcgcggctgctggacatcacactcacgcagcgcggccagtcggcc
ggcgagccggtcatcatggccggcgtgcccttccattcggtcgagagctacctggcgcgc
ctgatcaagctgggcgagtcggtcgcgatttgcgagcaggtgggcgacgtggccaccgcc
aaggggccggtggagcgcaaggtggtgcgcgtggtcacccccggcacgctgaccgacacc
gagctgctgtccgacaagaccgaggcgctggtgatggcggtacaccccggtgcccgcacc
ggcctgggcctggcctggctgtcggtgacgcagggcatcgtgttcctggcgcagtgcgcc
agcgacgagctggccgactggatcgcccgcgtcggccccggcgaggtgctctacagcgcc
gaggtgacccccgcgttcgagaaatcgctgcagcagatcagcgcccagcccctgcccagc
ggcgcgcgctgcgtggccgtggtgcggccggcctgggcctttgacgccgggctgggtgag
cgcaagctgctcgaacaactccaggccgccagcctgggcgcctgggacgcgcaggacctg
aaggacgcgcacgccgcggccgccgcgctgctggcctacgccgaacacacgcagggccgc
gcgctcacccacatcaggagcctgcaggtggcgcgcagcggcgagctgatcgacctgccg
gtcaacacgcggcgcaacctcgaactcacccacaccctgcgcggcgagaccagcccgacg
ctgttctcgctgctggacacctgccacacgggcatgggcagccgcgcgctgcgccactgg
ctgctgtcgccgaggcgcgagcgcaccgaggcgcgggaacggctggccgccatcgaccgg
ctgcgtggtgggttgtggcaaacgctgcgtgttgaactcaaggggtcgagcgacgtcgag
cgcatcaccgcccgaaccgcactgcgccaggtgcgcccgcgcgagctggtgggtctgacg
gcgacgctgggccggtcgttgcagctgtcgaaggcgctggccaccggcctgggcgccacg
ccacccgcgctgctgcagcgcatcgccgccgacctgacaccacccgcgggctgtgccgag
ctgctggcccaggccatcgcgcccgagccggccgccctggtgcgcgacggtggcgtgatc
gccgacggcttcgacgccgaactcgacgagctgcgcgccatccagaccaactgcgacggc
ttcctgatcgacctcgaaacccgcgaacgcgcgcgcaccggcatcgccaacctgcgcgtg
cagttcaacaaggtgcacggcttctacatcgaggtcacgcagggccagctggacaaggtg
cccgacgactaccgccggcgccagacgctcaagaacgccgagcgcttcatcacgcccgag
ctcaaggcctttgaagacaaggcgctcagcgcgcaagaccgtgccctggcgcgcgagaaa
tatctctacgagctgctgctcgacgagatgcagtcctggatcgacccgctgacgaaactg
gcccgtgccatggccgcgctggacgcgctgtgtgcgctggccgaacgctcgctgacgctg
aactgggccgagcccacgttcgcgcccgagccctgcatcgagatccgcggcggccgccac
ccggtggtggaagcgcgcctgaacgaaaccaccggcggcagtttcattgccaacgacacc
gtgctgggcggcaagcagcgcatgcaggtcatcaccggccccaacatgggcggcaagagc
acctacatgcgccaggtcgcggtgatcgtgctgctggccagcatgggctcgtacgtgccc
gccgccagctgccgcctcggcccgatcgacgccatccacacccgcatcggtgcggccgac
gacctggccaacgcgcagtcgaccttcatggtcgagatgaccgaggcggcgcagatcctg
cacgccgccacgcccgaaagcctggtgctgatggacgagatcggccgcggcacctccacc
ttcgacggcctggccctggccggtggcatcgccgcccacctgcacgacaaggcgcgctgc
ttcacgctgttcgccacccactacttcgagctcaccgagtttccggccacccaccacggc
gcggtgaacgtgcacgtgagcgcggtcgagggcggcggcaagagcggcatcgtgttcctg
caccagatcgagcccggtccggccagccgcagctacggcatccaggtcgctcgcctggcc
ggcgtgcccggcgcggtggtacagcacgccaagcacgcgctggccgcgctggaggcgcac
agcgaaagcagccgtgtgcaggtggacctgttcgccccgccaccggccccacccgaacct
gaaacgcccccggtgctggccgccctggccaccatcgaccccgatgcgctgagcccacgc
gaggcgctggaccagctctacgccctcaagaaactcgccacgaaaccatga
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