Hydrogenophaga pseudoflava: HPF_18595
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Entry
HPF_18595 CDS
T06073
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hpse
Hydrogenophaga pseudoflava
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpse03016
]
HPF_18595 (truA)
Enzymes [BR:
hpse01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HPF_18595 (truA)
Transfer RNA biogenesis [BR:
hpse03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPF_18595 (truA)
Prokaryotic type
HPF_18595 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QBM29709
UniProt:
A0A4P6X3J2
LinkDB
All DBs
Position
3897363..3898160
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AA seq
265 aa
AA seq
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MPAGGRIALGVSYNGRNYDGWQSQPSGQTVQDKLERALARFLDVPAVNTLCAGRTDAGVH
GLNQVVHFDSPLVRPENAWVRGTNSFLPPDIAVQWARKVPPGFHARASATGRRYAYVLLE
SPVRPSVDQGQVGWVFRPLDLAAMQSAANALLGEHDFTSFRASSCQAHSPVKDMRRIEIA
RRGAYWRFEFEASAFLHHMIRNIMGCLIAVGTGNRPPSWMAEVLAAQSRDAAAPTFAPDG
LYFLGPVYDPSWNIPDRTPAFDWLP
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgccggccggtgggcgcatcgcattgggcgtgtcctacaacggccggaactacgacggc
tggcagagccagcccagcggccaaacggtccaggacaagctcgaaagggccctggcccgc
tttctggatgtgcctgcggtgaataccctttgcgccgggcgcaccgatgctggcgtgcac
ggactgaaccaggtggtgcatttcgacagcccgctggtgcggcctgaaaacgcctgggtg
cgcggcaccaacagcttcctgccgcccgacatcgccgtgcaatgggcgcgcaaggtgcca
ccaggctttcacgcacgggccagcgccaccggccggcgctatgcctacgtactgctcgaa
tcgcccgtgcgccccagtgtggaccagggacaggtgggctgggtgttccgcccgctggac
ctggccgccatgcaaagcgctgccaacgcgctgctgggcgaacacgacttcacgtcgttc
cgagcgtcgtcctgccaggctcacagcccggtcaaggacatgcgccgcatcgagatcgcc
cggcgcggtgcctactggcgcttcgaattcgaagcctcggccttcctgcaccacatgatc
cgcaacatcatgggctgcctgattgctgtcggaaccgggaaccgcccgccgtcgtggatg
gccgaggtgctggccgcccaaagccgcgacgccgccgcgcccacctttgcacccgacggc
ttgtatttcctgggtccggtctacgatccgtcctggaacatcccggaccgcacacccgct
ttcgactggttgccctga
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