Hydrogenophaga pseudoflava: HPF_18765
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Entry
HPF_18765 CDS
T06073
Name
(GenBank) DNA binding protein, nucleoid-associated
KO
K03746
DNA-binding protein H-NS
Organism
hpse
Hydrogenophaga pseudoflava
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hpse03036
]
HPF_18765
03400 DNA repair and recombination proteins [BR:
hpse03400
]
HPF_18765
Chromosome and associated proteins [BR:
hpse03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
HPF_18765
DNA repair and recombination proteins [BR:
hpse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HPF_18765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS
Histone_HNS_N
Cdh1_DBD_1
V-SNARE
CysS_C
DUF6616
Mobilization_B
Motif
Other DBs
NCBI-ProteinID:
QBM29743
UniProt:
A0A4V1AC01
LinkDB
All DBs
Position
complement(3926574..3926882)
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AA seq
102 aa
AA seq
DB search
MATYSELMAQAQALMSQAEQARKNELAAAIADIKAKMKEYGITVTDLGGAAAGAKKAAKS
KSKAVAKYRGPNGELWAGGPGRKPEWVRAVLAAGKSLEDYRI
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctattctgaactgatggcacaggcgcaggcattgatgagtcaggccgagcag
gcgcgcaagaacgaactggccgccgctatcgccgacatcaaagcgaagatgaaggaatat
ggcatcacggtgactgatttgggtggtgcagcggctggcgccaaaaaggccgccaagtcg
aaatccaaggctgtcgccaagtaccgtggccccaacggggagctgtgggccggcggcccg
ggccgcaagccggagtgggtgcgcgcggtgctggctgcgggcaagagccttgaggattac
cgcatttga
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integrated database retrieval system
