Hydrogenophaga pseudoflava: HPF_19235
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Entry
HPF_19235 CDS
T06073
Symbol
lcfB6
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hpse
Hydrogenophaga pseudoflava
Pathway
hpse00061
Fatty acid biosynthesis
hpse00071
Fatty acid degradation
hpse01100
Metabolic pathways
hpse01212
Fatty acid metabolism
hpse02024
Quorum sensing
hpse04146
Peroxisome
Module
hpse_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HPF_19235 (lcfB6)
00071 Fatty acid degradation
HPF_19235 (lcfB6)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HPF_19235 (lcfB6)
09145 Cellular community - prokaryotes
02024 Quorum sensing
HPF_19235 (lcfB6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hpse01004
]
HPF_19235 (lcfB6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hpse04147
]
HPF_19235 (lcfB6)
Enzymes [BR:
hpse01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HPF_19235 (lcfB6)
Lipid biosynthesis proteins [BR:
hpse01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HPF_19235 (lcfB6)
Exosome [BR:
hpse04147
]
Exosomal proteins
Exosomal proteins of breast milk
HPF_19235 (lcfB6)
Exosomal proteins of breast cancer cells
HPF_19235 (lcfB6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
QBM29836
UniProt:
A0A4P6X5A9
LinkDB
All DBs
Position
complement(4029650..4031209)
Genome browser
AA seq
519 aa
AA seq
DB search
MNLAHLLQRKALEHPDRAAIFSGTQAVATHAQWAERAARVGAHLRAVGLTPGDRVLLFMR
NHPRYLELLFGAWWAGLVAVPVNAKLHLKEVQWIVENAGARWAFVTADIVPDPAELTGLD
GVMEVDSAECDAWVNVDPGKGEGHIYIEERAPDDTAWLFYTSGTTGRPKGVMITHRNLLT
MGLGYFNDVDHVDPQDAIAYAAPMSHGAGLYALPHLMAGARHVVPASGGFDAAELFDLGR
QLGPLSLFAAPTIVKRIVDEAEAQGLTPEQCGQSFKTIVYGGAPMYAADIRRALRTMGPR
FVQIYGQGESPMTGTALGRAHLADTAHPRHEARIASVGVAQTPVRIRVAGPNGQSLPPGE
VGEVLIRGDSVMAGYWQNPEATQAAIRDGWLWTGDMGALDADGFLTLKDRSKDLIISGGS
NIYPREVEEVLLHAPAVAEVAVVGAPDPEWGEIVVAFVVPQPGAALDAKTLDGFCLDQIA
RFKRPKRYEFVEALPKNNYGKVLKTVLRERVKEKAKGKA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgcccacctgctgcagcgcaaggcgctcgaacaccccgaccgcgcggccatc
ttcagcggcacacaggccgtggccacccacgcccaatgggccgagcgcgctgcgcgagtg
ggtgctcacctgcgcgcggtgggcctgacgcccggtgaccgcgtgctgctcttcatgcgc
aaccacccgcgctacctggaactgctgttcggcgcctggtgggccgggctggtggcggtg
ccggtgaacgccaagctgcacctcaaggaagtgcagtggatcgtggagaacgccggggca
cggtgggctttcgtcacggcggacatcgtgcccgacccggcggaactcaccgggctcgac
ggcgtgatggaggtggacagcgccgaatgcgacgcctgggtcaacgtggacccaggcaag
ggcgaaggccacatatatatagaggagcgcgcccccgacgacaccgcctggctgttctac
accagcggcaccaccggccggcccaagggcgtgatgatcacgcaccgcaacctgctcacc
atgggcctgggctacttcaacgacgtcgatcacgtcgatccgcaggacgccatcgcctac
gccgcacccatgtcgcacggggcggggctctacgccctcccgcacctcatggccggcgcg
cggcacgtggtgcccgcctcgggcggcttcgacgccgccgagctgttcgacctcggccgc
cagctcggaccgctctcgctgtttgccgcgcccaccatcgtcaaacgcatcgtcgacgaa
gccgaggcgcagggcctcacgcccgaacagtgcgggcagagcttcaagaccatcgtctac
ggcggcgcacccatgtacgccgccgacatccgccgcgcgctgcgcaccatgggcccgcgc
ttcgtgcagatctacggccagggcgaaagccccatgaccggcaccgccctcggccgcgcc
cacctggcagacaccgcccacccgcggcacgaggcgcgcatcgcctccgtcggcgtggcg
cagaccccggtccgcatccgcgtcgccgggcccaacggccaatcactgcccccaggcgag
gtgggtgaagtgctgatccggggcgacagcgtcatggccgggtactggcagaacccggag
gccacgcaggcggccatccgcgacggctggctctggaccggcgacatgggcgcgctcgac
gccgacggcttcctcaccctcaaggaccgcagcaaggacctgatcatcagcggcggcagc
aacatctacccgcgcgaggtggaagaggtgctgctgcacgcgcccgccgtggccgaagtc
gccgtggtcggcgcgcccgaccccgaatggggcgaaatcgtggtggcgttcgtggtgccg
caaccaggggcggcgctggatgcgaagacgctcgacggcttctgcttggaccagattgcg
cggttcaagcggcctaagcggtacgagtttgtcgaggcgctgccgaagaacaactatggg
aaggtgttgaagacggtgttgcgggagcgggtgaaagagaaggcgaaaggcaaggcatga
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