Hydrogenophaga pseudoflava: HPF_19380
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Entry
HPF_19380 CDS
T06073
Symbol
aspS
Name
(GenBank) Aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
hpse
Hydrogenophaga pseudoflava
Pathway
hpse00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPF_19380 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hpse01007
]
HPF_19380 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpse03016
]
HPF_19380 (aspS)
03029 Mitochondrial biogenesis [BR:
hpse03029
]
HPF_19380 (aspS)
Enzymes [BR:
hpse01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HPF_19380 (aspS)
Amino acid related enzymes [BR:
hpse01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HPF_19380 (aspS)
Transfer RNA biogenesis [BR:
hpse03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HPF_19380 (aspS)
Prokaryotic type
Other AARSs
HPF_19380 (aspS)
Mitochondrial biogenesis [BR:
hpse03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HPF_19380 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
QBM29864
UniProt:
A0A4P6X830
LinkDB
All DBs
Position
complement(4054233..4056035)
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AA seq
600 aa
AA seq
DB search
MAMRSHYCGLVTEALLGQTVQLCGWVNRRRDHGGVIFIDLRDREGYVQVVCDPDRPDMFK
TAEDVRNEFCVQVTGLVRARPAGTTNDKLKSGQIEVLCHELKVLNPSVTPPFQLDDDNLS
ETTRLTHRVLDLRRPYMQNNLMLRYRVAMEVRKFLDANGFVDIETPMLTKSTPEGARDYL
VPSRVHDGHFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQIDIETS
FLTEQDIRDMFQGMIKTVFQNVLNVDLGEFPVMAYGEAMHRYGSDKPDLRVKMEFTELTD
VMADVDFKVFSAPATMKNGRVVALCVRGGAEMSRSEIDAYTEFVKIYGAKGLAWIKVNEV
AKGKDGLQSPIVKNLHDKAIAEILSRTGAQDGDIIFFGADKAKIVNDAIGALRLKIGHSE
LGKKNGLFEDRWAPMWVVDFPMFEHDEEEDRWTAVHHPFTAPKDGHEDWMVTAPEKCIAK
GYDMVLNGWEIGGGSVRIHRADVQQKVFDALKITPEEAQLKFGFLLDALQYGAPPHGGLA
FGLDRIVTLMTGAESIRDVIAFPKTQRAQCLLTQAPSPVDEKQLRELHIRLRNPDAVKTA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggccatgcgttcccactattgcggtctggtgaccgaagccctgctggggcaaaccgtg
caactctgcggctgggtgaaccgccgccgcgaccatggcggtgtgatcttcatcgacctg
cgcgaccgcgaaggctacgtgcaggtggtctgcgatccggaccgcccggacatgttcaag
accgccgaagacgtgcgcaacgaattctgcgtgcaggtcaccggtctggtgcgcgcccgc
cccgccggcaccaccaacgacaagctcaagagcggccagatcgaggtgctctgtcacgag
ctgaaggtgctcaacccctcggtcacgccgccgttccagctggacgacgacaacctgagc
gagaccacgcgcctgacgcaccgcgtgctggacctgcgccgcccctacatgcagaacaac
ctgatgctgcgctaccgcgtggccatggaagtgcgcaagttcctggacgccaatggcttc
gtcgacatcgagaccccgatgctgaccaagagcacgcccgagggtgcgcgcgactacctc
gtgcccagccgcgtgcacgacggccacttcttcgcgctgccgcagtcgccccagctgttc
aagcagctgctgatggtcgcgggctttgatcgttattaccagatcaccaagtgcttccgc
gacgaggacctgcgcgccgaccgccagcccgagttcacccagatcgatatagagacctcg
ttcctgaccgagcaggacatccgcgacatgttccagggcatgatcaagacggtgttccag
aacgtgctgaacgtggatctgggcgagttcccggtcatggcctacggcgaagccatgcac
cgctacggttccgacaagcccgacctgcgcgtgaagatggagttcaccgagctcaccgac
gtgatggccgacgtggacttcaaggtcttcagcgcgcccgccaccatgaagaacggccgc
gtggtcgccctgtgcgtgcgcggcggcgccgagatgagccgcagcgagatcgacgcctac
accgagttcgtcaagatctacggcgccaagggcctggcctggatcaaggtcaacgaagtg
gccaagggcaaggacggcctgcagtcgcccatcgtcaagaacctgcacgacaaggcgatt
gccgagatcctctcgcgcactggtgcgcaggacggcgacatcatcttcttcggcgctgac
aaggccaagatcgtcaacgacgccatcggcgcgctgcgcctgaagatcggccacagcgaa
ctgggcaagaagaacggcctgttcgaggaccgctgggcgccgatgtgggtggtggacttc
ccgatgttcgaacacgatgaggaagaagaccgctggacggccgtgcaccaccccttcacc
gcacccaaggacggccacgaggactggatggtcaccgcgcccgagaagtgcatcgccaaa
ggctacgacatggtgctcaacggctgggaaatcggtggcggctcggtccgcatccaccgt
gccgatgtgcagcagaaggtgttcgacgcgctgaagatcacgcccgaagaggcgcagctc
aagttcggcttcctgctggacgcgctgcagtacggcgcccccccgcacggcggcctggcc
ttcggcctggaccgcatcgtcacgctgatgaccggcgccgagtcgatccgcgacgtgatc
gccttccccaagacccagcgcgcccagtgtctgctgacccaggcgcccagcccggtggac
gagaagcagctgcgcgagctgcacatccgcctgcgcaatccggatgcggtcaagacggcc
tga
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