Hydrogenophaga pseudoflava: HPF_19905
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Entry
HPF_19905 CDS
T06073
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hpse
Hydrogenophaga pseudoflava
Pathway
hpse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPF_19905 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpse03019
]
HPF_19905 (groL)
03110 Chaperones and folding catalysts [BR:
hpse03110
]
HPF_19905 (groL)
03029 Mitochondrial biogenesis [BR:
hpse03029
]
HPF_19905 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hpse04147
]
HPF_19905 (groL)
Enzymes [BR:
hpse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HPF_19905 (groL)
Messenger RNA biogenesis [BR:
hpse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HPF_19905 (groL)
Chaperones and folding catalysts [BR:
hpse03110
]
Heat shock proteins
HSP60 / Chaperonin
HPF_19905 (groL)
Mitochondrial biogenesis [BR:
hpse03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HPF_19905 (groL)
Exosome [BR:
hpse04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HPF_19905 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HPF_19905 (groL)
Exosomal proteins of breast cancer cells
HPF_19905 (groL)
Exosomal proteins of colorectal cancer cells
HPF_19905 (groL)
Exosomal proteins of bladder cancer cells
HPF_19905 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QBM29967
UniProt:
A0A4P6X1A4
LinkDB
All DBs
Position
4159841..4161484
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVIFGGEARARMVEGVNVLANAVKTTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGI
DRAVESLIAELKKASKPTTTSKEIAQVGSISANSDTSIGEIIANAMDKVGKEGVITVEDG
KSLQNELDVVEGMQFDRGYLSPYFINNPEKQAALLDNPFVLLFDKKISNIRDLLPTLEAV
AKAGRPLLIIAEDVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKV
IAEEVGLTLEKVTLADLGQAKRIEVGKENTTIIDGAGAAADIEARVKQIRVQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALL
RAKQAAGAIKGDNADQDAGIKLVLKAIEAPLREIVANAGGEPSVVINKVLEGKGNFGFNA
ANDTYGDMIEMGILDPTKVTRTALQNAASVASLMLTTECMVAESPKDDAPAMPGGGMGDM
GGMGMGM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtcattttcggcggcgaagcccgcgcccgcatggttgaaggcgtg
aacgtcctggccaacgcggtcaagaccaccctgggccccaagggtcgcaacgtggtgctc
gagcgctccttcggcgcccccaccgtgaccaaggacggcgtgtccgtggccaaggaaatc
gaactcaaggacaagctccagaacatgggcgcccagatggtcaaggaagttgcttccaag
acttcggacaacgctggtgacggcaccaccaccgccaccgtgctggcccaggccatcgtg
cgcgaaggcatgaagtacgtggccgccggcatgaacccgatggacctcaagcgcggtatc
gaccgtgccgtcgagtccctgatcgccgagctgaagaaggcctccaagcccaccaccacc
agcaaggaaatcgcccaggtcggctccatctccgccaacagcgacacctccatcggcgag
atcatcgccaacgcgatggacaaggtcggcaaggaaggcgtgatcaccgtggaagacggc
aagtccctgcagaacgagctggatgtcgtggaaggcatgcagttcgaccgcggctacctg
tcgccctacttcatcaacaaccccgagaagcaggccgccctgctggacaacccgtttgtc
ctgctgttcgacaagaagatcagcaacatccgtgacctgctgcccacgctggaagccgtg
gccaaggccggccgtccgctgctgatcattgccgaagacgtcgaaggcgaagccctggcg
accctggtggtcaacaccatccgcggcatcctgaaggttgtggctgtgaaggctcctggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgacgggcggcaaggtc
atcgccgaagaagtcggcctgaccctcgagaaggtgaccctggccgatctgggccaggcc
aagcgcatcgaagtgggcaaggaaaacaccaccatcatcgacggcgccggcgctgccgct
gacatcgaagcccgcgtgaagcaaatccgcgtgcagatcgaagaagccaccagcgactac
gaccgcgagaagctgcaagagcgcgtggccaagctggccggcggcgtggccgtcatcaag
gtcggtgccgccaccgaagtcgagatgaaggaaaagaaggcccgcgtggaagacgccctg
cacgccacccgcgctgccgtggaagaaggcatcgtcgccggtggtggcgtggccctgctg
cgcgccaagcaagccgctggcgccatcaagggtgacaacgccgaccaggacgctggcatc
aagctggtcctcaaggccatcgaagccccgctgcgcgaaatcgtggccaacgccggtggc
gagccctccgtcgtgatcaacaaggtgttggaaggcaagggcaacttcggtttcaacgcc
gccaacgacacctacggcgacatgatcgaaatgggtatcctggacccgaccaaggtgacc
cgcaccgcgctgcagaacgccgcctccgtggcgtccctgatgctgacgaccgagtgcatg
gttgccgagtcccccaaggacgacgcacccgccatgcccggtggcggcatgggcgacatg
ggcggcatgggcatgggcatgtaa
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