KEGG   Hydrogenophaga pseudoflava: HPF_20040
Entry
HPF_20040         CDS       T06073                                 
Symbol
polC4
Name
(GenBank) DNA polymerase III PolC-type
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
hpse  Hydrogenophaga pseudoflava
Pathway
hpse03030  DNA replication
hpse03430  Mismatch repair
hpse03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hpse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HPF_20040 (polC4)
   03430 Mismatch repair
    HPF_20040 (polC4)
   03440 Homologous recombination
    HPF_20040 (polC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpse03032]
    HPF_20040 (polC4)
   03400 DNA repair and recombination proteins [BR:hpse03400]
    HPF_20040 (polC4)
Enzymes [BR:hpse01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HPF_20040 (polC4)
DNA replication proteins [BR:hpse03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HPF_20040 (polC4)
DNA repair and recombination proteins [BR:hpse03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HPF_20040 (polC4)
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: QBM29994
UniProt: A0A4P6X8E5
LinkDB
Position
complement(4189290..4189958)
AA seq 222 aa
MIATLLASVRSWWGLQDPVASSDAERWVVVDVETSGLDAKNDRLLAIAAIGLRVGPAPAS
RPEIVLGDSFEVVLRQEAVSDRDNILLHGIGEQRQRDGVEPATALQAFVDFIGEAPLLAF
HSAFDETLIDRHCRRHLGRRLVNPWLDLAHLCAVTHEEVRARSLDDWMAHFGILCPARHQ
ASADTLATAELLLRLWPRIAPEGGRWRDAVRLAGRRRWLAGR
NT seq 669 nt   +upstreamnt  +downstreamnt
atgattgcaacgctgctggcgtcggtgcggtcatggtgggggctccaggacccggtagct
tcttccgacgccgaacgctgggtggtcgtcgacgttgagaccagtggactggacgcaaag
aatgaccggctcctggccattgcagccatcggtctcagggttggtcctgcgccggcatcg
cggccggagattgtgctgggcgacagcttcgaggtggtgctgcgtcaggaggcggtgtct
gatcgcgacaacatcctcctgcacggcatcggtgagcagcgtcagcgggacggcgtggag
cctgcgacggcgctgcaggcctttgtggacttcattggcgaggcgccgctgctggccttt
cacagcgccttcgacgaaaccctgatcgaccggcattgccggcggcacctgggacgccgg
ctggtcaacccttggctggacctggcccatctctgtgccgtgacccatgaggaggtgcgg
gcccggtcgctggacgactggatggcgcatttcggcatcctgtgcccggcccggcaccaa
gcgtccgccgacacgctggccacggccgagctgttgctacggttgtggcctcgcatcgcg
ccggagggtggccgctggcgcgatgccgtgcgactggctggacgccggcgctggctagcc
gggcgctga

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