Hydrogenophaga pseudoflava: HPF_20930
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Entry
HPF_20930 CDS
T06073
Symbol
ompB
Name
(GenBank) Outer membrane protein B precursor
Organism
hpse
Hydrogenophaga pseudoflava
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Ortholog
Paralog
GFIT
Motif
Pfam:
Autotransporter
VacA_C
Phage_OMP
Motif
Other DBs
NCBI-ProteinID:
QBM30171
UniProt:
A0A4P6X8M1
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All DBs
Position
complement(4370361..4372724)
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AA seq
787 aa
AA seq
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MKNKQAHSPRSGNARARRRDLRQAATGLATASVLAVGLPAATALAGTGSCVGSGAIEVSD
PRIGECQLQSGDALSVTGTGSITGDGASTVVGVRVVSGQTGVQITNDGDIVGNPSDGIWN
QGTITQITNRGRIGAGPFALGVYNDNIGTITVLNNEAGAEIQAGSGSTNAIESYGTLGTL
NNAGRILGGIRASNTALNLSGGSARITGPVNIVGSSGSVNVVSGAVFTTENTFRSSLFRI
QSGARLVVGSSSHVIEAYSLTPDAFRNAGTLHVPEGVHAQITGNYMQSGALRLGASSSSS
FGRLTVSGDVDLQPSATFVVDVNGTNTLAAGDTLAGVLTAGGALTNAAPATNVSDNSALF
NFQSQTNGSQVDLLVEAAGTDPEPPPAPPPAPAPTPSPGGGGRGGGAAPQPAPAPPPGQG
IVPATIRAGLINGVPTAQVLDGYIRGGRTGTDWDVVVTALGRLPDDASVARAVGQAMPSM
HGNAAQALLAHVSSTGSAVVGQQAVGGPDGADAKPGTGLWVQPLNHRVDQDRYRQASGYR
VRTQGLAGGYQASMVSGSTLGFGLAYLDGRVDGRDFALGHRSDLESVQVLGYGSYDLSAW
RLQWQADATRSSVKSERNLGFIGRLAKASYRGHASHLGLSMGRPMTLATTSVTPSVGLDW
RRARNNAYTETGAGALDLRVAAQKAEELVAKLGVEARHPLGAQSHLLAQAAVGYDLSGGR
DSTSAQFVGGGPVFSTPGSEQRRTLAELGLGVAHKVGDAMEMRVHYDLSLRGKMTDQSVS
LRLDWRF
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaagcaagcacactccccccggtccggcaacgcgcgcgccaggcgccgcgat
ctgcgtcaggcggccaccgggctcgcgacagcctccgtcctggccgtggggctgcccgct
gcgaccgcgctggccggcaccggctcgtgtgtcgggtcgggtgcgatcgaggtgtcggat
cctcgaatcggcgaatgccaattgcagagcggtgacgcgctgtctgtcaccgggaccggc
agcatcaccggcgacggcgcgagtacggtcgtgggggtgcgggtcgtttcggggcagact
ggtgttcagatcaccaacgacggcgacatcgtcggcaacccgtccgacggcatctggaac
caggggacgatcacccagatcacgaaccgtgggcgcatcggtgccgggccattcgccctc
ggcgtttacaacgacaacattggcacgatcaccgtcctgaacaacgaggcgggcgccgag
atccaggcgggttcgggaagcaccaatgccattgagtcctacggcacgctcggcaccctc
aacaatgcggggcgcatcctgggcgggatccgggccagcaacacggcgctcaacctgagc
ggcggttcggcgcgcatcacggggccggtcaacatcgtgggttcgagcggctctgtcaac
gttgtttccggcgccgtcttcaccaccgaaaacaccttcagatccagcctgttccgcatc
cagtcgggtgcgcgcctggtggtggggtcctcttcccatgtcattgaggcctactccctc
acgccggacgctttccgcaacgccggcaccctgcacgttcccgagggcgtccacgcccag
atcacgggcaactacatgcagtccggggccttgcgcctgggggccagcagctcctccagc
ttcggacgcctgacggtgtccggcgacgtggatctgcagccgagcgccacgtttgtggtg
gacgtcaacggcacgaacaccctcgctgcgggcgatacgctggcgggtgtgctgaccgcc
gggggcgccctcaccaacgccgcgccggccacgaatgtgtccgacaacagcgccttgttc
aacttccagtcgcagaccaatggcagccaggtggacctgctggtcgaggctgcgggcaca
gacccggagccgccccccgcgcctcccccggctccagcccccacgccttctccgggtggc
ggcggccggggcggtggtgccgcaccccagcctgcgcccgcgcccccccctgggcaaggc
atcgtgccggcgaccatccgggcgggtctgatcaacggtgtaccgaccgcccaggtgctg
gatggctacatccgcggcgggcgcacaggcacggactgggatgtcgtggtgacggccctg
gggcgcctgcccgacgacgcgtcggtggcgagggccgtcgggcaggccatgccctcgatg
catggcaacgcggcccaggccctgctggcacatgtctcgagcaccggttcggccgtggtc
gggcagcaggccgtgggtggtccggacggcgccgacgcgaagcccggcacgggactctgg
gtccagccgctgaaccaccgggtggatcaggaccgctaccgccaagccagcggttaccgg
gtgcgcacacaaggtctggcgggtggttaccaggcgtccatggtgtccggcagcaccctg
ggcttcggactggcttacctggatggccgtgtggacggtcgtgacttcgcgctggggcac
cgcagcgatctggaaagtgtccaggtgctgggctatggttcctacgacctctcggcatgg
cgcctgcaatggcaggccgacgccacgcgcagttcggtcaagtccgagcgcaacctggga
ttcatcgggcgcttggccaaggccagctaccgcgggcacgcctcgcatctggggctgagc
atggggcgccccatgaccctggccaccacctcggtcacgccctcggtgggtctcgactgg
cgccgcgcgcgcaacaacgcgtacaccgaaacaggtgccggggcgctggatctgcgggtc
gccgcccagaaggccgaggaactggtcgccaagctgggcgtggaggcacgccatccgctg
ggtgcgcagagccatctgctggcgcaggccgctgtcgggtacgacctgtccggcggtcgc
gacagcacctcggcccagttcgtcgggggtggtccggtgttttcaacccccggatcggag
cagcggcgcaccctggccgagctggggctgggtgtggcccacaaggtcggcgatgccatg
gaaatgcgcgtgcactacgacctgagcctgcgcgggaaaatgaccgatcagagcgtcagc
ctgcgtctggactggcgcttttga
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