Hydrogenophaga pseudoflava: HPF_21500
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Entry
HPF_21500 CDS
T06073
Symbol
rsmB2
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
hpse
Hydrogenophaga pseudoflava
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpse03009
]
HPF_21500 (rsmB2)
Enzymes [BR:
hpse01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
HPF_21500 (rsmB2)
Ribosome biogenesis [BR:
hpse03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HPF_21500 (rsmB2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_25
FtsJ
NusB
Methyltransf_31
Methyltr_RsmF_N
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
QBM30279
UniProt:
A0A4P6X4T8
LinkDB
All DBs
Position
complement(4496209..4497546)
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AA seq
445 aa
AA seq
DB search
MNDALSPRQVPRLSDQLHEVARCVLAVEQGRSLTEVLPQVPSGLRPGVQSLTFQVLRHLG
TARAVARLLARRPPAPAALALLHTALALLIGDGQGASYPPHTLVDQAVDAAKRGRDTRMQ
SGFLNACLRRYLRESSALLAQARQDPSALWNHPAWWVERVRRDHPAHWEAILAASNQPGP
MVLRVNRRRVTREAYAAQLAEQGIGAVPLGEDGLLLASPQPVERLPGFDQGLCSVQDGAA
QLAAGLLLEGRDWRRGDRVLDACAAPGGKTAHLLERADLDLLALDVDPRRCERIHQNLQR
LGLQAEVRAADAGEPSGWWDGRPFDAILLDAPCTASGIVRRHPDVRWLRRPGDVGQLVAI
QRRLLDTLWPLLKPGGRLVYCTCSVFRAEGQEQVDAFLERHTDALALPSPGHLRPGTVIA
NGEFNDNDPGGYDGFFYARMDKARP
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgacgctctttctccgcgccaggtgccccgcctgagcgaccagttgcacgaagtg
gcgcgctgcgtgctcgcggtcgaacaggggcgctcgctgaccgaggtcctgccccaggtg
ccgtcgggcctgcgccccggcgtgcagtccctgacctttcaggtgctccgtcacctgggc
acggcccgcgccgtggcgcggctgctggcccggcgcccgccggcccccgcggcgctggca
ctgctgcacaccgcgctggccctgctgatcggcgacgggcagggcgcctcctacccgccc
cacaccctggtcgaccaggcggtcgacgccgccaagcgcgggcgcgacacgcgcatgcag
tccggctttctcaacgcctgcctgcggcgctacctgcgcgaatcgtcggcactgctggcg
caggcccggcaggacccgtctgccctctggaaccacccggcctggtgggtcgagcgcgtg
cggcgcgaccatcccgcccactgggaggccatcctggcggcgagcaaccagcccggcccc
atggtgctgcgcgtgaaccgccgccgcgtgacgcgcgaggcgtacgcggcgcagctggcc
gaacagggcatcggcgcggtgccgctcggcgaggacgggctgttgctggcctcgccgcaa
cccgtggaacggttgcccgggtttgaccaggggctgtgttccgtgcaggacggtgcggcc
cagctggcggccggcctgctgctggagggccgcgactggcgccggggtgaccgggtgctg
gatgcctgcgcggcgccgggtggcaagacggcccatctgctggagcgcgccgatctggac
ctgctggcgctggacgtcgatccgcgccgctgcgagcgcatccaccagaacctgcaacgg
ctgggcctgcaggccgaggtgcgggccgccgacgctggggagccctcgggctggtgggac
ggccgccccttcgatgccatcctgctggatgcgccatgcaccgcgtcgggcatcgtgcgc
cgccacccggacgtgcgctggctgcgccgcccgggcgatgtcgggcagctggtggcgatc
cagcgccggctgctggacaccctctggccgctgctcaagccaggcgggcgcctggtctat
tgcacctgttcggtctttcgtgccgaggggcaggaacaggtcgatgcgttccttgagcgc
cacaccgacgcccttgcgctcccttccccagggcatttgcgacccggaactgtcatcgcc
aacggggagttcaacgacaatgatccgggtggatacgacggatttttctacgcccgcatg
gacaaggcgaggccttga
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