Hydrogenophaga pseudoflava: HPF_21580
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Entry
HPF_21580 CDS
T06073
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hpse
Hydrogenophaga pseudoflava
Pathway
hpse03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPF_21580 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpse03400
]
HPF_21580 (ung)
Enzymes [BR:
hpse01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPF_21580 (ung)
DNA repair and recombination proteins [BR:
hpse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPF_21580 (ung)
Prokaryotic type
HPF_21580 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QBM30291
UniProt:
A0A4P6X8X2
LinkDB
All DBs
Position
complement(4513180..4513977)
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AA seq
265 aa
AA seq
DB search
MRQESFEWDGVAPTRPSTDPVPWLREIDPARWPVAETWRLVLDRFWSDKAGQGLLAFLRE
RLRVGAVIYPPEPLRALSWGGAADVRVVIVGQDPYHGPGQAEGLAFSVASGVRKPPSLRN
IFKELCRDLGLPEPEDGSLAPWARQGVLLLNTCLTVEDGQAGSHAGQGWEVLTDAVIEAC
SASAVPKVFLLWGAHAQKKADLIDVSRHKVLCANHPSPLSASRGPVPFLGCGHFGAANRW
LAEQGVAPIDWSLMALSDTVKKTVA
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcgacaggaatcttttgaatgggacggcgtggcgccgacgcggccatcgaccgatccg
gtgccctggctcagggagatcgacccggcgcgttggccggtcgcagagacctggcgcctg
gtgctcgaccgattctggtcggacaaggccggacaggggctgctggctttccttcgcgaa
cgcctgcgggtcggcgcggtgatctatccgccggaacctttgcgggccttgtcctggggg
ggggcggccgatgtccgtgtggtgatcgtcgggcaggacccctatcacgggccaggtcag
gccgaagggctggcgttttcagtggcgtcgggtgtgcgcaaacccccgagcctgcgcaac
attttcaaggagctatgccgtgacctcggactgccggagccggaagatggctcactggcg
ccgtgggcgcgacaaggcgtgttgctgctcaacacctgcctgacggtggaggatggtcag
gcgggtagtcatgcagggcagggctgggaagtgctcaccgatgccgtcatcgaggcttgc
agtgcatctgccgtgccaaaggtgtttttgttgtggggggctcacgcccagaagaaggcc
gacttgatcgatgtgtcccgccacaaggtgctgtgtgccaaccacccgtcacccttgtct
gccagtcgcggtccggtcccgttcctggggtgtggccactttggtgcggcgaaccggtgg
ctggcggagcagggtgttgctccaattgactggtcgttgatggcgttgagtgacacggtc
aaaaaaaccgtggcataa
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