Hydrogenophaga pseudoflava: HPF_23040
Help
Entry
HPF_23040 CDS
T06073
Symbol
rsmE
Name
(GenBank) Ribosomal RNA small subunit methyltransferase E
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
hpse
Hydrogenophaga pseudoflava
Brite
KEGG Orthology (KO) [BR:
hpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpse03009
]
HPF_23040 (rsmE)
Enzymes [BR:
hpse01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
HPF_23040 (rsmE)
Ribosome biogenesis [BR:
hpse03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HPF_23040 (rsmE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
Motif
Other DBs
NCBI-ProteinID:
QBM30582
UniProt:
A0A4P6X1X6
LinkDB
All DBs
Position
4827949..4828671
Genome browser
AA seq
240 aa
AA seq
DB search
MPRFHCPIPLSAGAELELPAAAARHVQVLRHQPGDAITLFNGEGGQWSATILRMGRSDVA
VKVGAFEDVEREPARRVHLAMGMPANERMDWLVEKAAELGVASLQPLHTAHSVLRLSGER
AAKKQGHWQSVAVAACEQCGGNRVPAVRPVADVAAWLRDSGHIAPLRCVLSLADGTRPLS
EVLREQPADTPVLFLSGPEGGLSAQEDALARTAGFVPVTLGPRILRAETAALAALVSAQV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgccccgctttcactgccccatcccgctgagcgccggcgccgagctggaactgccggcc
gctgccgcgcgccacgtgcaggtgctgcgccaccagcccggcgatgcgatcaccctgttc
aacggagaaggtggccagtggtcggccaccatcctgcgcatgggccgcagcgacgtcgcg
gtcaaggtcggcgcgtttgaagacgtcgagcgcgagccggcgcggcgcgtgcacctggcg
atgggcatgccggccaacgagcgcatggactggctggtggaaaaggccgccgaactcggc
gtggccagcctgcagcccctgcacaccgcgcacagcgtgctgcgcctcagtggtgaacgt
gcggccaagaagcagggtcactggcaatcggtcgcggtcgcggcctgcgaacagtgcggc
ggcaaccgcgtgccagcggtgcggccggtggccgacgtggccgcctggttgcgtgacagc
gggcacatcgccccgctgcgctgcgtgctctcgctggcggacggcacacgcccgctgtcg
gaggtgctgcgcgagcagccggccgacacaccggtgctcttcctcagcggcccggaaggc
ggactgtctgcgcaggaagacgccctggcgcgcaccgcgggctttgtgcccgtcacgctg
gggccccgcatcctgcgggcggaaacggcggcgctcgcggccctggtgagcgcccaggtg
tga
DBGET
integrated database retrieval system
