Helicobacter pylori Sat464: HPSAT_04055
Help
Entry
HPSAT_04055 CDS
T01897
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hpt
Helicobacter pylori Sat464
Pathway
hpt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPSAT_04055 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpt03021
]
HPSAT_04055 (rho)
03019 Messenger RNA biogenesis [BR:
hpt03019
]
HPSAT_04055 (rho)
Transcription machinery [BR:
hpt03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HPSAT_04055 (rho)
Messenger RNA biogenesis [BR:
hpt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HPSAT_04055 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_22
AAA_28
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
ADO05547
LinkDB
All DBs
Position
804816..806132
Genome browser
AA seq
438 aa
AA seq
DB search
MNENAPAHKSPHKVKTHTPVSGYHIEDLRTYPTEKLLEIANKLKVENPQEFKRQDLMFEI
LKTQVTQGGYILFTGILEIMPDGYGFLRGFDGSFSDGHNDTYVSPSQIRRFALRNGDIVT
GQVRSPKDQEKYYALLKIEAINYLPSDEIKNRPLFDNLTPLFPDEPIKLEYEPTKVTGRM
LDLFSPVGKGQRALIVAPPRTGKTELMKELAQGITSNHPEVELIILLVDERPEEVTDMQR
SVKGQVFSSTFDLPANNHIRIAELVLERAKRRVEMGKDVVVLLDSITRLARAYNAVTPSS
GKVLSGGVDANALHRPKRFFGAARNIEEGGSLTIIATALIETGSRMDEVIFEEFKGTGNS
EIVLARNIADRRIYPAFDILKSGTRKDNILLGKDRLTKVWVLRNVMQQMDDIEALSFVYS
KMQQTKDNEEFLNLMNEK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaacgcgcctgcacacaagagtccgcacaaagtcaaaacacacacgccagtg
agcggttatcacattgaagatttacgcacctaccctactgaaaagcttttagaaatcgct
aacaagctcaaagtggaaaacccccaagaattcaaacgacaagacttgatgtttgaaatt
ttaaaaacccaagttacgcaaggcggatacattctttttaccgggattttagaaatcatg
cctgatggctatggctttttaagagggtttgatgggagtttttcagacgggcataacgac
acttatgtcagcccttctcaaatcaggcgttttgctttaaggaatggcgatattgttacc
ggtcaagtgcgatcccccaaagaccaggaaaaatactacgcccttttaaaaatagaagcc
atcaattatttgccttcagatgagattaaaaaccgccctttgtttgacaatctaaccccc
ctattcccggatgaaccaatcaaattagaatacgaacccactaaagttaccggcagaatg
ctggatttattcagccctgtggggaagggtcaaagggctttgatcgtcgcgccaccaagg
actgggaaaacggagctgatgaaagaactcgctcaaggcatcacctctaaccaccctgaa
gtggaactgattatccttttagtggatgagcgccctgaagaagttacggatatgcaacga
agcgttaagggtcaagtttttagctccacttttgacttgcccgcaaacaaccatataaga
atcgctgaattagtcctagaaagggctaaaaggcgagtggaaatgggaaaagatgtggtg
gttttattggattctatcacccgtttagccagagcgtataacgctgtaacgccttcaagc
ggtaaggttttaagtggaggcgtggatgcgaacgccttgcacaggcccaagcgctttttt
ggagccgcaaggaatattgaagaaggcgggagcttgacgattatcgctactgcgttgatt
gaaacgggatctagaatggatgaggtgatttttgaagaatttaaaggcaccgggaatagc
gaaatcgttttagcgaggaatattgcagacaggcgcatttacccagcctttgatatttta
aaatccggcacacgaaaagataatatcttgcttggcaaagaccgcttgactaaagtgtgg
gttttaaggaatgtgatgcaacaaatggatgacatagaagccttaagctttgtgtattct
aaaatgcaacaaactaaggacaatgaagaatttttaaatttaatgaatgagaaataa
DBGET
integrated database retrieval system
