Helicobacter pylori Sat464: HPSAT_06250
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Entry
HPSAT_06250 CDS
T01897
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hpt
Helicobacter pylori Sat464
Pathway
hpt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hpt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HPSAT_06250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpt03021
]
HPSAT_06250
03400 DNA repair and recombination proteins [BR:
hpt03400
]
HPSAT_06250
Enzymes [BR:
hpt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HPSAT_06250
Transcription machinery [BR:
hpt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HPSAT_06250
DNA repair and recombination proteins [BR:
hpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HPSAT_06250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Enkurin
Myb_DNA-bind_4
Motif
Other DBs
NCBI-ProteinID:
ADO05957
LinkDB
All DBs
Position
complement(1265908..1266942)
Genome browser
AA seq
344 aa
AA seq
DB search
MKVIKTAPLIPSEIKVLEKEGNRVKISLAPFEFGYAVTLAHPIRRLLLLSSVGYAPVGLK
IEGVHHEFDSLRGVTEDVSLFIMNLKNIRFIAKVLVGQDSSLENQSVVVDYSFKGPMELR
ARDLSSEHIEIVNLEMPLATINEDAQLNFSLIIYKGMGYVPSENTRELMPEGYMPLDGSF
TPIKKVVYEIENVLVEGDPNYEKIIFDIETDGQIDPYKAFLSAVKVMSKQLGVFGERPIA
NTEYSGDYAQRDDAKDLSAKIESMNLSARCFNCLDKIGIKYVGELVLMSEEELKGVKNMG
KKSYDEIAEKLNDLGYPVGTELSPEQRENLKKRLEKLEDKGGND
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttatcaaaacagcacctttgatcccatcagaaattaaggtgttagagaaagag
ggcaatcgggttaagatttctctggctccatttgagtttggttacgctgttacgctcgct
catcctattagaaggctcttgcttttaagctctgtggggtatgctcctgtaggtttaaag
attgaaggcgtgcatcatgagtttgactcattaaggggggttactgaagatgtgtcgctt
tttatcatgaatttaaagaatatccgctttatagccaaggtgttagtggggcaggatagc
tctttagaaaaccaatcggttgtggtggattattcttttaaagggcctatggagcttagg
gctagggatttgagttctgagcatatagaaatcgtcaatcttgaaatgcctctagccaca
atcaacgaagacgctcaattgaatttttcgctcattatctataaaggaatggggtatgtc
ccaagcgaaaacacaagggaattgatgcctgagggctacatgccactagacggctctttc
acgccgattaaaaaggttgtttatgagattgaaaatgttttggttgagggcgatcccaac
tatgaaaaaatcatttttgatattgaaacagatgggcagattgacccttataaagcgttt
ttatcagcggtgaaagtgatgagcaagcaactaggcgtttttggcgaaaggcccattgcc
aatacagagtattcaggcgattacgcccaaagagatgacgctaaagatttgagcgctaag
attgaaagcatgaatttgagtgctaggtgttttaattgcttggataaaatcggcatcaag
tatgtgggcgaattggtgttgatgagcgaagaagagcttaagggcgtgaaaaacatgggt
aaaaaatcctatgatgaaatcgctgaaaaattgaatgatttgggctatccggtaggcaca
gaattaagccctgaacaaagagagaatttaaagaaaagattagaaaaattagaagataaa
ggaggtaacgactga
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