Helicobacter pylori Cuz20: HPCU_01205
Help
Entry
HPCU_01205 CDS
T01894
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hpu
Helicobacter pylori Cuz20
Brite
KEGG Orthology (KO) [BR:
hpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpu03032
]
HPCU_01205
03400 DNA repair and recombination proteins [BR:
hpu03400
]
HPCU_01205
Enzymes [BR:
hpu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPCU_01205
DNA replication proteins [BR:
hpu03032
]
Prokaryotic type
DNA Topoisomerases
HPCU_01205
DNA repair and recombination proteins [BR:
hpu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPCU_01205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Terpene_syn_C_2
SpecificRecomb
Motif
Other DBs
NCBI-ProteinID:
ADO03425
UniProt:
A0AB32X6B0
LinkDB
All DBs
Position
233628..235562
Genome browser
AA seq
644 aa
AA seq
DB search
MYKNCVFIIESPNKIAKIKELTGSSFVFATGGHFVELVNIEVSKEFNPIFEIKKSTDKKK
DKSTHINYMINQCKDKVVYIATDPDREGYGIGYKFYEKIKNIAKTIYRTEFHEITKSGVE
KGLNNAVLFSQSNLNLYYSWLGRIVSDQFVGFTLTPYLRKNIKNFEVSAGRVQTPALSIL
VELDRKIQAFEQKNIDEKLSYSIEAIIDVLGSQISITLVEENKRKVFETKELAQNFLNDL
KNNLNPLAFLDAVEQKDKEKSPPKPFTTSNLLKDGVRILEMGVKQIQEHAQKLFEAGLIT
YIRTDSEALSKEYLQEHQAFFENIYPSVYEYREYRAGKNSQAEAHEAIRITHPHCYEDLK
KVCEKHNITDIDDLKVYTLIFFNTICSQSKNAIYENTTLNFKVKTHSFKCSFSKLKSKGF
KAIKDLEEEKKDEEEIESDLDFSSLQLKTQMPILDFNIKELKAKAPSPYTESAFIAMMET
YGIGRPSTYTSVFEILKNKNYITLEGKNSKITPTALGKSIVDFFLNDNQTQWIAISKVDN
SFTKKLEEMLDMIIKDGKSAYLDLMQNIQKKLGTEISNLYRNNSNNNISATKKEMIPPTE
KQLNFVETIEKTLQIKASDMTKKDKFACMKFIEEHSKKMPKKDN
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaactgcgtatttatcatagaaagtcccaataagatcgctaaaatcaaagaa
ttaacaggaagttcatttgtttttgcgactggtgggcattttgttgagctagtcaatatt
gaagtgagtaaagaatttaatcctatttttgaaatcaaaaaaagcacggataagaaaaag
gataaatccactcatatcaactatatgataaatcaatgtaaagataaagtggtctatatt
gctactgaccctgatagagagggttatggtataggttataaattttatgaaaaaatcaaa
aatatagctaaaacaatttatcgcactgagtttcatgaaatcacaaaaagcggtgtagaa
aaaggcttgaacaatgctgtgctattttctcaaagcaatctcaatctatattatagttgg
ctaggtaggattgtaagcgatcaatttgtaggctttactttaacgccttatttgcgcaaa
aacattaaaaattttgaagtgagtgctggtagggttcaaactcctgctctttccatttta
gtagaattagacagaaaaatccaagcctttgaacaaaagaatattgatgagaaattaagt
tatagcatagaagctattattgatgtgttaggttctcaaatctctattactttagtagaa
gagaataaaaggaaagtgtttgagaccaaagaattagcccaaaactttttaaatgactta
aaaaacaatcttaaccccttagcttttttagacgcagtagagcaaaaagataaagaaaaa
tctccacctaaacctttcactacttctaatcttttaaaagatggggttagaattttagaa
atgggcgttaagcaaatccaagaacacgcccaaaaactttttgaagctggattgattact
tatattcgcaccgatagtgaagcgttaagtaaagaatacttgcaagagcatcaagcgttt
tttgaaaatatttatcctagcgtgtatgagtacagagaatatagggctggtaaaaattca
caagctgaagcgcatgaggctataagaattacacaccctcactgctatgaagatcttaaa
aaagtgtgtgagaaacacaatattacagatattgatgatttaaaagtctatacgcttatc
ttttttaacaccatttgctctcaaagtaaaaacgctatttacgaaaacacaactttaaat
tttaaagtaaaaacgcacagctttaaatgcagttttagcaaactcaaatctaaaggcttt
aaagcgattaaagacttagaagaagaaaagaaagatgaagaagagattgaaagcgatctt
gatttttctagcttgcaattaaaaactcaaatgcctattttagattttaatatcaaagaa
ctaaaagctaaagctcctagcccttatactgaaagcgcttttatcgcaatgatggaaacc
tatggcataggaagacctagcacttatacaagtgtatttgagatcttaaaaaacaaaaat
tacattacattagagggcaaaaatagtaagatcacgcccacagctcttggtaaaagcatt
gttgatttctttttgaatgataaccaaacacaatggattgctatttctaaagtggataat
agttttacaaaaaaattagaagaaatgttagatatgattataaaagatggtaaaagtgct
tatcttgatttaatgcaaaatatccaaaagaaattaggcacagaaatttctaacttatat
agaaataatagcaataacaacatttctgctacaaaaaaagaaatgatacctccaactgaa
aaacaacttaattttgtagaaactatagaaaaaactcttcaaataaaagcttctgatatg
acgaaaaaagacaagtttgcgtgcatgaagtttatagaagaacatagtaaaaaaatgccc
aaaaaggataattga
DBGET
integrated database retrieval system
