Helicobacter pylori Cuz20: HPCU_04865
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Entry
HPCU_04865 CDS
T01894
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hpu
Helicobacter pylori Cuz20
Brite
KEGG Orthology (KO) [BR:
hpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpu03016
]
HPCU_04865 (truD)
Enzymes [BR:
hpu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HPCU_04865 (truD)
Transfer RNA biogenesis [BR:
hpu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPCU_04865 (truD)
Prokaryotic type
HPCU_04865 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
GutM
Motif
Other DBs
NCBI-ProteinID:
ADO04130
UniProt:
A0AB32X896
LinkDB
All DBs
Position
995695..996840
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AA seq
381 aa
AA seq
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MNLNFMPLLHAYNHASIDFHFNSSARDFCVHEVPLYEFSNTGEHAVIQVRKSGLSTSEML
QIFSQILGVRIAELGYAGLKDKNALTTQFISLPKKYAPLLEKNTSNFQEKNLKILSLNYH
HNKIKLGHLKGNRFFMRFKKMTPLNAQKTEQVLEQIAQFGMPNYFGAQRFGKFNDNHQEG
LKILQNQTKFAHQKLNAFLISSYQSYLFNALLSKRLEISKIISAFSVKENLEFFKQKNLN
INPDTLKALKNQAHPFKILEGDVMRHYPYGKFFDALELEKESERFLKKEAVPTGLLDGKK
ALYAKNLSLEIEKEFQHNLLNSHAKTLGSRRFFWVFVENITSQYIKEKAQFELGFYLPKG
SYASALLKEIKHEKGENNDEF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaattttatgcccctattgcatgcttataaccatgcgagcattgattttcat
ttcaattctagcgctagggatttttgcgtgcatgaagtgcctttgtatgaattcagtaac
acaggcgaacatgccgttattcaagtgagaaaaagcggtttaagcacttcagaaatgctt
caaattttttctcaaattttaggggtaagaatcgctgagttgggttatgcgggcttgaaa
gataaaaacgcgctgacgactcaattcatctcactccctaaaaaatacgcccctttatta
gaaaaaaatacgagcaactttcaagaaaaaaaccttaaaatcctgtctttgaattaccac
cataataaaatcaaattagggcatttgaaagggaatcgcttttttatgcgttttaaaaaa
atgacccccctaaacgctcaaaagactgaacaggttttagaacaaatcgcgcagtttggc
atgcctaattattttggagcgcaacgctttgggaagttcaatgacaaccaccaagagggt
ttaaaaatcttgcaaaatcaaacgaaattcgcccaccaaaaattaaacgcttttttaatt
tcaagctatcaaagttatttgtttaacgcgcttttaagcaaacgattagaaatcagtaaa
atcattagcgcttttagtgtcaaagaaaatttagaattttttaaacaaaaaaatttaaat
atcaatccagacaccctaaaagcccttaaaaaccaagcccacccctttaaaattttagaa
ggcgatgtgatgcgccattacccttatgggaagttttttgacgctttagaattagaaaaa
gagagcgaaaggtttttgaaaaaagaagctgtgcctaccgggttattagacggcaaaaaa
gctctttatgcaaaaaatttgagtttagaaattgaaaaagaattccagcataacctttta
aatagccatgctaaaacgctaggctctaggcggtttttttgggtgtttgtagaaaatata
acttctcaatatataaaagaaaaagcgcaatttgaattgggattttacttgcctaaaggg
agttatgcgagcgcgttgctcaaagaaatcaagcatgagaaaggagaaaataatgacgaa
ttttga
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