Helicobacter pylori Cuz20: HPCU_07815
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Entry
HPCU_07815 CDS
T01894
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hpu
Helicobacter pylori Cuz20
Pathway
hpu03030
DNA replication
hpu03430
Mismatch repair
hpu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPCU_07815
03430 Mismatch repair
HPCU_07815
03440 Homologous recombination
HPCU_07815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpu03032
]
HPCU_07815
03400 DNA repair and recombination proteins [BR:
hpu03400
]
HPCU_07815
Enzymes [BR:
hpu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPCU_07815
DNA replication proteins [BR:
hpu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPCU_07815
DNA repair and recombination proteins [BR:
hpu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPCU_07815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ADO04699
UniProt:
A0AB32X9Y4
LinkDB
All DBs
Position
complement(1579374..1580237)
Genome browser
AA seq
287 aa
AA seq
DB search
MSDSLLHKDIQALIARLKHQDLSLGMLEKSLSRLIYDEVNLEYLKACGLNFVETSENLIT
LKNLKTPLKDEVFSFIDLETTGSCPLKHEILEIGAVQVKGGEIINRFETLVKVKSVPDYI
AELTGIAYEDTLNAPSVHEALQELRLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNL
KLCTLDLSKRAILSMRYSLSFLKELLGFGIEVSHRAYADALASYKLFEICLLNLPSYIKT
TMDLIDFSKCANTLIKRPPRARHQETLAPFPLFERTKGLLNIIKATS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagcctcttgcataaagacattcaagccctaatcgctcgcttaaaacaccag
gatttaagcttgggcatgctagaaaaatcgctctctcgccttatttatgatgaagtcaat
ttggaatatttaaaagcgtgcgggcttaatttcgtagaaacgagcgaaaatttaatcacg
ctcaaaaaccttaaaaccccccttaaagatgaggttttttcctttattgatttagaaacc
accggctcttgccccctaaaacatgagattttagaaatcggagctgtgcaagtgaagggg
ggggaaatcatcaatcgttttgaaacccttgtgaaagtcaaaagcgttcctgattatatc
gctgagcttacaggcatcgcttatgaagacaccctaaacgccccaagcgtgcatgaagcc
ttgcaagaattgcggctttttttaggcaatagcgtgtttgtagcccataacgctaatttt
gattacaattttttagggcgttattttgtagaaaaattgcattgccccttattgaattta
aagctttgcactttggatttatccaaacgggccattttgtccatgcgttattctttgagc
tttttaaaagagcttttagggtttggtatagaagtcagccatagagcctatgcggacgct
ttagcgagctataagctctttgaaatatgcttattgaacttgcccagttacatcaaaaca
acgatggatttgattgatttttccaaatgcgctaacaccttgatcaaaagacccccaaga
gccagacaccaggagactctagcgccatttcctctttttgagaggacaaagggtttgtta
aatatcataaaagcaaccagttaa
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