Helicobacter pullorum: NCTC13154_00088
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Entry
NCTC13154_00088 CDS
T08673
Name
(GenBank) putative vacuolating cytotoxin (VacA)-like protein
Organism
hpul
Helicobacter pullorum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
VEJ06005
LinkDB
All DBs
Position
1:complement(88592..90520)
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AA seq
642 aa
AA seq
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MRVGNSFKAYRSDISLTDLSSIYTKDFFLDTTANIKFIGGGSGFGSINASNSATFDGGVE
FKLANPLMQTDNKTYLILDTPSLNGTSLQEGKVEVIGSSGGTINNAEIVKVGDKYYLSFN
GAIPPIDPDIGGGDGSGGSGGDSGNGGSDGGNTGGGGETGGDSGDSGNGGNQGGSGGDSG
DSGNDGNQGGDGQGGNEGGEPGNGGDSEGDSNGDNSDGNQGGGETGGDSGQGGNPGGSGD
SDVDNPDDENQGGDNNGDSGNGGNQGSGDLGGGSESGGDNPQKPNRPTSNNPVYNAIYEA
LVGKGGIIDDEATLHKATQTIEKQLDHIKEGPKSYQGSVMHHNMLGRIAHTTRTQYTLNS
QQKYASIAGDYVRMPYFEKEETQNNVYVNVLAGYSHYKDSDTSDYGINFGYDKEIKDSFF
GGIYGSVSKRNMKAENMDLDGYNYNIGLYGRSHLTKAVELDMLGYYTNSQSEYTRTFAGI
GNNTASYDTHNIGFQARLGYRVKFENGHSLKPYIGFFGSYYHMPQYRENGNVLPITRSEN
DFMNLYGAVGVEYRKINENGGSFFVAIEGVQGKPVFGDKDYEVRMGVSRIKYENEEEFFG
SVFAGANLPISENWDLSATVMAQAYDNGLTSVSGSVGLRYAF
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
ttgagagttggaaattctttcaaagcttatcgtagcgatatttcattgacagatttatca
agcatttacacaaaggattttttcctagatacaactgctaatatcaaatttatcggcggt
ggtagcggatttggctctatcaatgcttctaattctgcaacttttgatggcggtgtggag
tttaagctcgctaatcctttgatgcaaaccgataataaaacctatctaattttggacacg
cctagcctaaatgggacaagcttacaagagggcaaagtcgaggtgattggctctagcgga
ggaacgattaataatgccgagattgtaaaagtgggcgataaatattatttaagttttaat
ggtgcgataccccctatagaccccgatataggtggaggcgatggcagtggtggctcaggt
ggagattctggaaatggaggtagcgatggcggaaataccggaggtggtggagaaaccggc
ggtgattctggtgattctgggaatggaggaaatcaaggcggtagtggcggtgattctgga
gattctggaaacgatggaaatcaaggcggagatggacaaggtggcaatgaaggtggagaa
cccgggaatggtggtgattctgaaggcgattctaatggtgataactctgatggaaatcaa
ggcggtggagaaactgggggagattcaggacaaggagggaatccgggcggaagcggtgat
tctgatgtagataatcccgatgatgagaatcaaggcggtgataataacggcgattctgga
aatggaggaaatcaaggaagtggcgatttaggcggcggaagtgagagtggaggggacaac
ccacaaaagcctaatcgcccaacttctaataatcctgtttataacgctatttatgaagct
ttggtaggaaaaggcggaatcatcgatgatgaggcaactttgcacaaagcaacacaaaca
atagaaaagcaacttgaccacatcaaagaaggtcctaaatcctatcaaggctcggtaatg
caccacaatatgctagggcgaatcgcccatacgacaaggactcaatacacacttaattcg
cagcaaaaatacgcaagcattgctggggattatgtgagaatgccttattttgaaaaagaa
gagacccaaaacaatgtgtatgtgaatgtgttagctgggtattcccattataaagatagc
gatacttcagattatggaatcaattttggttatgacaaagagataaaagatagctttttt
ggcggaatctacggctctgtgagcaaacgcaatatgaaagctgagaatatggacctcgat
gggtataattataatatcggtttgtatgggaggagccatttaaccaaagcagtggaactt
gatatgcttggatactatacaaattcccaaagtgaatacacaaggacttttgcaggaatt
ggaaataatacagcctcttatgatacgcacaatattggctttcaagcaagacttggatac
cgagtgaagtttgaaaatgggcacagcttaaagccttatattggattttttggaagttat
tatcatatgccacaatacagagaaaatgggaatgtcctgcccataacaagaagcgaaaat
gactttatgaatctctatggtgctgtgggtgtggaataccgcaaaatcaatgagaatggc
ggttctttttttgtggcaatagagggggttcaagggaagccggtttttggcgataaagat
tatgaagtgagaatgggagtctctagaatcaaatatgaaaatgaagaggagttttttggg
tcagtttttgcaggggctaatttgcctattagcgaaaattgggatttgagtgcgactgtt
atggcacaagcttatgataatgggcttacttctgtgagcggtagtgtcgggcttaggtat
gctttctaa
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