Helicobacter pullorum: NCTC13154_00416
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Entry
NCTC13154_00416 CDS
T08673
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hpul
Helicobacter pullorum
Pathway
hpul03030
DNA replication
hpul03430
Mismatch repair
hpul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC13154_00416 (dnaX)
03430 Mismatch repair
NCTC13154_00416 (dnaX)
03440 Homologous recombination
NCTC13154_00416 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpul03032
]
NCTC13154_00416 (dnaX)
03400 DNA repair and recombination proteins [BR:
hpul03400
]
NCTC13154_00416 (dnaX)
Enzymes [BR:
hpul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC13154_00416 (dnaX)
DNA replication proteins [BR:
hpul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC13154_00416 (dnaX)
DNA repair and recombination proteins [BR:
hpul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC13154_00416 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_14
AAA_5
AAA_30
DNA_pol3_gamma3
TIP49
AAA_lid_RFC1
AAA_19
VraX
AAA_16
AAA_18
DEAD
AAA_assoc_2
ARM_6
PIF1
Mg_chelatase
DUF2551
ResIII
Motif
Other DBs
NCBI-ProteinID:
VEJ06335
LinkDB
All DBs
Position
1:402287..404008
Genome browser
AA seq
573 aa
AA seq
DB search
MEQHNEALALKYRPMDFDELVGQEAVSRTLSLALESKRLSHAYLFSGLRGSGKTSSARIF
ARALQCENGPKAKPCGVCANCVAANPHKMSHIDIIELDGASSRKIDDIRDLIEQTKYRPN
MGRYKIFIIDEVHMLTKEAFNALLKTLEEPPEYVKFILATTDPLKLPATILSRTQHFRFK
RISDKSIFNHLKSILHKENITYQDEALNMLIRSGSGSLRDTLTLLDQVIIYSNYNITAES
CASMLGLINPQSLSDFFDEIFKNDKKALLETIEGFFEYECEMLLDEMSIFLKDKLLSAED
VRYSPVIIDRFFRIITQAKQLLSLGCDDNFVLTLSIFKMLEALKIDDIDKAIKTLEQGLL
DVGESRQNLKTDRIEIPKQESIVTPKAEIKPQSIKGADLFALLVKRIYERNYELGEIFEK
NIHFISYENGVLTWGSCAVGEEKQRLSNSYSNVIKGIVLEIFGIETRIEFVAQEPKGDCN
QTITQEKANKTESIKEEAEISKIQESSTPKEEQIEISQYTETPKATIKENQDIPNPQKNI
QDEVNEALELPLLQKAKELLEIRQIKVRPKAEG
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacataatgaggctttagcattaaaatatcgtccgatggattttgatgagctt
gtagggcaagaagcggttagtcggacactttctttggcgctagaaagcaagaggctatcc
catgcttatttattttcggggcttagaggaagtgggaaaacttctagtgcaagaatcttt
gcgcgtgctttgcaatgtgaaaatggtccaaaggctaaaccttgcggagtatgtgcaaat
tgtgtcgcagcaaatcctcataaaatgagccatattgatattattgaattagatggtgct
tcaagtaggaaaattgatgatattagagatttaattgagcaaacaaaatatcgccccaat
atgggaagatataagattttcattatcgatgaagtgcatatgctaaccaaagaagcattt
aatgcactattaaagacgctagaagagccaccagagtatgtaaaatttatcttagcgaca
actgatcccttgaaattgcctgcaacaattttaagtcgaactcaacattttcgttttaaa
agaatctctgataaaagtatttttaatcatttaaaaagcattttgcacaaagaaaatatc
acttatcaagatgaagcattaaatatgttgatacgcagtggttctgggtcattaagggat
actttgacgcttttagatcaagtgattatttattctaattataatatcactgctgaatct
tgtgcgagtatgcttgggttgattaatccacaaagtttgagcgatttttttgatgagatt
tttaagaacgataaaaaagcacttttagaaaccatcgaagggttttttgaatatgaatgt
gaaatgctgttagatgaaatgagtatttttcttaaagataagctcttaagtgcagaagat
gtgcgatatagccctgttattatagatagattttttagaatcattactcaagcaaagcag
cttttatctttgggttgtgatgataattttgttttgactttgagtatttttaaaatgtta
gaagcattaaaaatagatgatattgacaaagctattaaaaccttagagcagggtttattg
gatgtaggggaatctcggcaaaatcttaaaacagataggatagagattccaaaacaagaa
agcattgtcactccaaaggcagaaattaagccacaatctatcaagggggcagatttattt
gcactgcttgtaaaaagaatttatgagagaaattatgagttaggcgagatttttgagaag
aatattcattttatttcttatgaaaatggggtattgacatggggaagttgtgcggtagga
gaggaaaaacaacggctttcaaatagctattctaatgtaattaaaggcattgtgcttgag
atttttggaatagagacacgcatagagtttgttgctcaagagcccaaaggggattgcaat
caaacaataacacaggaaaaagctaataaaacagaatcgataaaagaagaggctgaaata
tcaaagattcaagaaagttctaccccaaaagaagagcaaatagagatttctcaatataca
gaaactccaaaagcaacaatcaaggaaaatcaagatattccaaacccccaaaaaaacatt
caagatgaggtgaatgaagccctagaacttcctctcttgcaaaaagccaaagaactcctt
gagattagacaaatcaaagtgcgtccaaaagcagagggatag
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