Helicobacter pullorum: NCTC13154_00419
Help
Entry
NCTC13154_00419 CDS
T08673
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
hpul
Helicobacter pullorum
Pathway
hpul02020
Two-component system
hpul02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hpul00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC13154_00419 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NCTC13154_00419 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpul03021
]
NCTC13154_00419 (rpoN)
Transcription machinery [BR:
hpul03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC13154_00419 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF3785
Motif
Other DBs
NCBI-ProteinID:
VEJ06341
LinkDB
All DBs
Position
1:405128..406411
Genome browser
AA seq
427 aa
AA seq
DB search
MKLRTQASTTLKAKLSSTLKSWLPILQSGVGELEETLGEFAKDNPYLEIQSGIATDFSSQ
SKKRKEGPRGLKNIDNEGIERFCIQEESLEETLKNQISPPLFPTRTSQEIAQKIIENLNE
EGYFEGDKEKIAKECGSSVEEVEKIRKRFAYLEPSGIGAENLIESFHFQLDSMDIQSEIY
SLCLRILGNLEKHSQYKNEACYAKAMRVIQSFKNPPALEYYQKEPEIIPDILIIQEAQSI
QVQINSQYYPSIQIEMPKKEAKEKIKHDFIKNKVKEARDLVDALEMRKATLYKIGLMIVE
YQYDFFMGGEIKPMKLKDLAEEFGHASSTISRAISNKFLECSRGIFPLRNFFATALDEDT
ANTTIKEFVSNLIKNENRQKPLSDNRILELIEEKFNIKIVRRTITKYRAQLNIASSSERK
RLYKMSV
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaagaactcaagcttctactactcttaaagctaagctttcttctacacttaag
agttggttgcctattttacaaagcggagttggggagcttgaagaaactttgggggaattt
gccaaagacaatccttatttggagatacaatcagggattgctacagatttttcttcccaa
agcaagaaacgcaaagaaggtccaagagggttaaaaaatatcgataatgagggcattgag
aggttttgtatccaagaagagagcctagaagaaacgctaaaaaatcaaatttctccaccc
ttatttcctacaagaacttcacaagaaattgcacaaaaaattattgaaaatttaaatgaa
gaggggtattttgaaggggacaaagaaaagattgcaaaagagtgtggtagcagtgtagaa
gaagtggagaaaatacgcaaaagatttgcttatttagagccatcgggtatcggggcagag
aatctcattgaatcatttcattttcagctagatagtatggatattcaaagtgagatttat
agtctttgtttgcgtattttggggaatttggaaaaacattctcaatataaaaatgaagct
tgttatgctaaggctatgcgtgtgattcagagctttaaaaatcccccggcattggaatat
tatcaaaaagaaccagagataattccagatattttaatcattcaagaagcgcaatctatt
caagtgcagattaatagtcaatattatccaagtatccaaatagaaatgcccaaaaaagaa
gccaaagagaaaataaagcatgattttattaaaaataaagtcaaagaagcacgagatttg
gtggatgctttggagatgcgtaaagcgacactttataagattggcttgatgattgtagaa
tatcaatatgatttttttatgggtggagagattaagccgatgaaactcaaagacttagca
gaagagtttggacatgcttcaagcacgatttctagggcaatttcaaataaatttttggaa
tgttctaggggaatctttccgcttagaaatttctttgccactgcacttgatgaggataca
gctaatacaactattaaagaatttgtaagtaatcttatcaaaaacgaaaatcggcagaaa
cctttgagtgataatagaatcttggaattaattgaagaaaaatttaatattaaaatcgtg
cgtaggactattacaaagtatagggcgcagttaaatatcgctagttctagtgagcgtaaa
agactttataaaatgtcagtatga
DBGET
integrated database retrieval system
