Helicobacter pullorum: NCTC13154_01022
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Entry
NCTC13154_01022 CDS
T08673
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hpul
Helicobacter pullorum
Brite
KEGG Orthology (KO) [BR:
hpul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpul03016
]
NCTC13154_01022 (truB)
Enzymes [BR:
hpul01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCTC13154_01022 (truB)
Transfer RNA biogenesis [BR:
hpul03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC13154_01022 (truB)
Prokaryotic type
NCTC13154_01022 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
RseC_MucC
Motif
Other DBs
NCBI-ProteinID:
VEJ07723
LinkDB
All DBs
Position
1:complement(1022530..1023420)
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AA seq
296 aa
AA seq
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MYGVKDSSIKIYVFKGEILNRIFVAKKPLFVSSNGYLGFLKRRDRIKKAGFSGILDPFAC
GTLVVAYGQYTRLFPFLPKNPKVYQATLWLGLESDSLDIENVKKIHHIQRFSEGYLEDLL
KKFCGEISFVPPKYSAKKIDGKKAYELARAGQKVQLKEQTMEIFKIEFLNYSHPFLSFKV
WVSEGSYIRSLGELIAKELGCMGGLSYLERLSEGGLVYENEKNLNPLEILGLPKILIEKN
QRNILEEKVKNGKKITQEELKIHKDGKYIVQFEDFFSIISKQEREIQYLANRIPLC
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
ttgtatggtgttaaggattctagcataaaaatttatgtttttaaaggcgagattttgaat
cgtatttttgtggcaaaaaagcctttgtttgtttcatctaatggatatttggggttttta
aaaagaagagatagaatcaaaaaggctggttttagcgggattttagatccttttgcatgt
ggaactttggttgtagcttatgggcaatatactcgacttttcccctttttgcctaagaat
ccaaaagtctatcaagccacactttggttggggttggagagcgattctttggatattgaa
aatgttaaaaagattcatcacattcaaagattttcagaaggatatttggaggatttgtta
aaaaagttttgtggtgaaatttcttttgttcctccaaaatatagtgccaaaaagattgat
ggcaaaaaagcttatgagcttgcaagagctggtcaaaaagtgcagctaaaagaacaaaca
atggagatttttaagatcgagtttttaaactattctcatccttttttgagttttaaagtt
tgggtgagtgagggtagttatatccgctctttgggtgaattgattgcaaaagagttgggt
tgtatgggcgggcttagttatcttgagcgattgagtgaagggggattggtttatgaaaat
gaaaaaaacttgaatcccttagagattttaggattgccaaagattcttattgaaaagaat
caaagaaatattttagaagaaaaggttaaaaatggcaagaaaattacacaagaagaatta
aaaatccataaagatggaaaatatatagtgcaatttgaagattttttttctataatttca
aaacaagaacgagagatacaatatttagcaaataggattcctttatgttga
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