Helicobacter pullorum: NCTC13154_01060
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Entry
NCTC13154_01060 CDS
T08673
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hpul
Helicobacter pullorum
Pathway
hpul00260
Glycine, serine and threonine metabolism
hpul00460
Cyanoamino acid metabolism
hpul00630
Glyoxylate and dicarboxylate metabolism
hpul00670
One carbon pool by folate
hpul00680
Methane metabolism
hpul01100
Metabolic pathways
hpul01110
Biosynthesis of secondary metabolites
hpul01120
Microbial metabolism in diverse environments
hpul01200
Carbon metabolism
hpul01230
Biosynthesis of amino acids
hpul01240
Biosynthesis of cofactors
hpul04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hpul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NCTC13154_01060 (glyA)
09102 Energy metabolism
00680 Methane metabolism
NCTC13154_01060 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NCTC13154_01060 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NCTC13154_01060 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NCTC13154_01060 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NCTC13154_01060 (glyA)
Enzymes [BR:
hpul01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NCTC13154_01060 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
VEJ07799
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Position
1:complement(1055130..1056380)
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AA seq
416 aa
AA seq
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MSYFLEKSDKEIFDIIGEELERQNTHLEMIASENFTFPSVMEAMGSVLTNKYAEGYPYKR
YYGGCEFVDKIEELAINRAKKLFGCEFANVQPHAGSQANAAVYAALLKPYDKILGMDLSH
GGHLTHGAKVSITGQMYQSFFYGVELDGYINYDKVQEIASITKPNLIVCGFSAYSRELDF
KRFREIADSVGAILLADIAHVAGLVVAGEYPNPFPYADVVTTTTHKTLRGPRGGMILTNN
EEYAKKIDKAVFPGMQGGPLMHVIAGKAVGFGENLKPEWKQYAKQVKANAKVLADVLQKR
GYKIVSGGTDNHLVLLSLLDKDFSGKDADLALGNAGITVNKNTVPGETRSPFVTSGVRIG
SPALSARGFKEAEFDIVANKIADVLDDIQNTQKQEQIKDELKQLALKFPVYNKAIF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagttattttttggaaaaatcagataaagaaatctttgatatcatcggagaggaatta
gagcgtcaaaatactcacttagaaatgattgcaagtgagaattttacatttcctagtgta
atggaagcaatggggagtgttttgacaaataaatatgcagaggggtatccttataaaaga
tattatggtggttgcgagtttgtcgataagatagaggaattggcgattaatcgtgcaaaa
aagctttttgggtgtgaatttgctaatgtgcaacctcacgcaggttctcaagcaaatgct
gctgtgtatgcagctttacttaagccttatgataagattttgggaatggatttgagccat
ggagggcatcttactcatggagcaaaagtaagtataacagggcaaatgtatcaaagcttt
ttttatggtgtagaattagatgggtatatcaattatgataaagttcaagaaattgcaagc
attacaaaaccaaacttgattgtttgtgggtttagtgcttattctagggaattggatttt
aagcgttttagggaaatagcagatagtgttggagcaattttgttggcagatattgcccat
gtcgctgggcttgttgtcgctggtgaatatcctaatccattcccttatgctgatgtagta
acaaccactacacataaaaccttaagaggtcctcgtggcggaatgatactgactaataat
gaagaatatgccaaaaagattgataaggctgtattcccgggaatgcagggtggtcctttg
atgcatgtaattgcggggaaagcagtcggctttggtgagaatctaaaaccagagtggaag
caatatgccaaacaagtaaaggctaatgcaaaagttttggcagatgttttgcaaaagaga
ggttataaaattgtaagtggtgggactgataatcacttggtattattgtcactactagat
aaggactttagtggaaaagatgcagatttggcattggggaatgcaggaattacagtcaat
aaaaatacagttccgggtgaaactcgtagcccatttgttacaagcggagttaggattggt
tctcctgcattgagtgctagaggatttaaagaagctgaatttgatattgtagcaaataag
attgcagatgttttagatgatatacaaaatactcaaaagcaagagcaaataaaagatgaa
ttaaagcagcttgcgttaaaattccctgtatataataaggcgatattttaa
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