KEGG   Helicobacter pullorum: NCTC13154_01256
Entry
NCTC13154_01256   CDS       T08673                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
hpul  Helicobacter pullorum
Pathway
hpul00300  Lysine biosynthesis
hpul00470  D-Amino acid metabolism
hpul01100  Metabolic pathways
hpul01110  Biosynthesis of secondary metabolites
hpul01120  Microbial metabolism in diverse environments
hpul01230  Biosynthesis of amino acids
Module
hpul_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:hpul00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    NCTC13154_01256 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    NCTC13154_01256 (dapF)
Enzymes [BR:hpul01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     NCTC13154_01256 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: VEJ08155
LinkDB
Position
1:complement(1267371..1268117)
AA seq 248 aa
MFFSKYSASGNDFILMHTFRYNEDSYSNLAKQICHRQEGIGADGLIVLKPHREYDFEWEF
YNADGSVAEMCGNGSRAAGMYARDLGLAGNSQKFLSKAGVIGVEIEGDWAESALSKAEVL
KTDICEFGKNWWLINTGVPHLVCEDLEIMGLNKEDLRFLRHKYNANINIASCREDRVLAR
TFERGVEDETLACGTGMAAMFYYLLLANKVKNPCLFNPASKEDLYLREENGKLYLKGKVR
KICDFIYP
NT seq 747 nt   +upstreamnt  +downstreamnt
atgttttttagtaaatattctgcaagtgggaatgattttattttgatgcatacttttaga
tacaatgaggattcttatagcaacttggcaaagcaaatttgtcatcgtcaagaaggtatt
ggggcagatggattgattgttttgaagcctcatagggaatatgattttgaatgggaattt
tataatgcagatggcagtgtagctgaaatgtgcggaaatggaagcagggcagctggtatg
tatgctagagatttgggtttggctgggaatagtcagaaatttttgagtaaggcaggggtg
attggagttgagatagaaggggattgggctgaaagtgcattgagcaaagcagaggtttta
aagacggatatttgcgaatttggtaagaattggtggttaataaatacaggcgtgcctcat
ttggtttgtgaggatttagagattatggggttgaataaagaagatttgagatttttaagg
cataaatataatgcaaatatcaatatagcttcttgtagagaagatagagtgttggcaaga
acttttgagcgaggagttgaagatgaaactctagcttgtgggacaggaatggcagcgatg
ttttattatttgttattagctaataaagtcaagaatccttgtctttttaatcctgcaagc
aaagaggatttgtatctaagggaggaaaatggcaaattgtatctcaaagggaaagtgaga
aaaatttgcgattttatttatccttaa

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