Helicobacter pullorum: NCTC13154_01688
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Entry
NCTC13154_01688 CDS
T08673
Symbol
rimO
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hpul
Helicobacter pullorum
Brite
KEGG Orthology (KO) [BR:
hpul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpul03009
]
NCTC13154_01688 (rimO)
Enzymes [BR:
hpul01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NCTC13154_01688 (rimO)
Ribosome biogenesis [BR:
hpul03009
]
Prokaryotic type
ribosomal protein modification factors
NCTC13154_01688 (rimO)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
NTPase_1
ExsA_N
Glyco_tran_WecG
QRPTase_C
Motif
Other DBs
NCBI-ProteinID:
VEJ08567
LinkDB
All DBs
Position
1:1703935..1705266
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AA seq
443 aa
AA seq
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MSKKLHLISLGCTKNLVDSEVMLGKLSEYENTQEIKEADVVIVNTCGFIEAAKTESIQTI
LEALNNKKENAILVASGCLSERYAKELKEEIPEIDIITGVGDYDKIDLMIEKRKKGEKIL
SNANGVFLANENDKRIISGSKIHAYIKLSEGCNQKCSFCAIPSFKGKLHSRTLESTLKEV
QNLAQKGFSDFTFISQDSSSYLRDLGIKDGLVDLVRGIDKLAKEGIGIKSARILYLYPAT
TSKKLIQTIIDSPIFHNYFDMPLQHISQKVLKQMGRGGEFKELLEMMRQAPNSFVRTSFI
IGHPGEEESDFVELCEFVEKFHFDRINFFAYSKEEGTKSAKMEQIPNKTINARLKKINQI
FQKQYRQSLKNLKNKELLCIVEGNSSEHEFFYAARDIRFAPQIDGEILINDKTIDETIQN
GYYKVKITEILGEDIIGCIVKKG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaaattacatttaatttctcttggttgcacaaaaaatctcgtagatagcgag
gtaatgcttggaaaattaagcgaatatgaaaatacacaagaaatcaaagaagccgatgta
gtaatagtcaatacttgcggatttattgaagctgcaaaaaccgaaagcattcaaactatc
ctagaagcactgaataataaaaaagaaaatgccattttggtggcaagtggctgtttgagc
gagcgctatgcaaaagaactcaaagaagagattccagaaattgacatcattacaggggtt
ggggattatgacaaaattgacttaatgatagaaaaacgcaaaaagggcgagaaaatccta
tctaatgctaatggagtgtttttggcaaatgaaaacgacaaacgcattattagtggctca
aaaatccatgcttatatcaagctctctgaaggttgcaatcaaaaatgtagcttttgtgct
atccctagtttcaaaggcaaattacactcaaggacactagaatccacgctcaaagaagtg
caaaatctcgcacaaaaaggctttagtgattttactttcatttcccaagattctagctct
tatctgcgagatttgggcataaaagatgggcttgttgatttggttagaggcatagataaa
ttagcaaaagaaggcataggcatcaaaagtgcaaggattttatatctctatcctgctacc
acctccaaaaagcttatccaaaccatcattgattcgccaatttttcacaactattttgat
atgcccttgcaacacatctcacaaaaagtcttaaaacaaatgggcagaggcggggaattt
aaagaattgctagaaatgatgaggcaagccccaaatagctttgtgcggacaagtttcatc
atcggacatccgggtgaggaagaatctgattttgttgaactttgtgaatttgtagaaaaa
ttccactttgatagaattaatttctttgcctactccaaagaagaaggcaccaaaagtgca
aaaatggagcaaattccaaacaaaactattaatgctaggctaaaaaaaatcaaccaaatc
ttccaaaaacaataccgacaaagcctaaagaatctcaaaaacaaagaattgctttgcatt
gttgagggcaactctagcgaacatgagtttttttatgcagcacgcgatatacgatttgca
ccacaaattgatggcgagattctcattaatgataaaaccattgatgaaactatccaaaat
ggctattacaaagtgaaaattacagaaattttaggggaagatataataggctgtatagtc
aaaaaaggctag
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