Henckelia pumila: 140859831
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Entry
140859831 CDS
T11037
Name
(RefSeq) protein argonaute 16 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
hpum Henckelia pumila
Brite
KEGG Orthology (KO) [BR:
hpum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpum03019
]
140859831
03036 Chromosome and associated proteins [BR:
hpum03036
]
140859831
Messenger RNA biogenesis [BR:
hpum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
140859831
Chromosome and associated proteins [BR:
hpum03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
140859831
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
140859831
microRNA pathway
RISC loading complex
140859831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Microp_apicomplexa_17
Motif
Other DBs
NCBI-GeneID:
140859831
NCBI-ProteinID:
XP_073118504
LinkDB
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Position
4:114754461..114760692
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AA seq
883 aa
AA seq
DB search
MESPALPPNANLQQAALPKRSVIDRTGFGTSGRPISLLANHFKVSLRCPNEIFYQYSVSI
SSEDNGVVDNKGIGRKIAEKLYQTYSSEFAGKTFAYDGEKCLYTVGPLPQNTLELTVILE
ESIAKHPRSPSDYGDGSGSGKRSKHSLQSKAFKVEISYVAKIPLKSISLALQGAEAENVQ
DGLRVLDVILRQKAANKGCLLVRQSFFHDDTRTFSDVGGGVAAVKGFYSSFRPTHGGLSL
NMDVSSTMILKPGPVVDFLLANQNLKDRRNIDWDKAKRMLKNLRVKARHNNREFKIIGLS
EKPCNQQFFSLKVKNGGNARDDGEILEITVFDYFVKHRGQELTFSAYMPCLDVGKPKRPN
YLPLELCSLVSLQRYKKALSGMQRASLVEQSRQKPPERIRVVTDAVRNYQYDDDPLLISC
GISIEKQLTQVDGRVLDVPKLKVGNGEDFFPRNGRWNFNNKKVLNPCRIECWSLVNFSAR
CDTSHLSRELINCGRNKGIHIERPYTIIEEDPQCSRASPFIRVERMFEQIMAKLPGPPEF
LLCILPERKNSAIYGPWKKKCLTNLGIVTQCTCPSKINDQYLTNLLLKINSKLGGTNSLL
ALEHSRSLPLINDKPTLIIGMDVSHGSPGQSDIPSIAAVVGSRSWPLISRYRAAVRTQSP
KVEMIESLYKPLENGEDDGIIRELLLDFYQTSNKRKPSQIIVFRDGVSESQFSQVLNIEL
DQIVKAYQHLGEVDVPKFTVVVAQKRHHTQLFQASAPENVPPGTVVDTKVVHPRNYDFYL
CAQAGMIGTSRPAHYHVLLNEIGFSPDDLQNLVHSLSYVYQRSTTAVSIVAPICYAHLAA
QQIGQFLKFEDSSETSSGQKSMSTAVPQLPRLHSNVAGSMFFC
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgcctgctttaccaccaaatgcaaatttacaacaagcagcactacctaagagg
tctgtaattgatagaactggattcggtacttccggacgacccatctctttgctcgcaaat
cacttcaaagtctcactcagatgtccaaatgaaatattttatcagtacagtgtttctatt
agttctgaggataatggagtggttgacaacaaaggaattgggaggaagatcgctgaaaaa
ctttaccaaacatactcttctgaatttgctggaaagacatttgcttatgatggggaaaaa
tgtctgtacacagtggggccgttgccgcagaacacgttggaacttacagtgattctcgag
gaatctattgccaagcatcctaggagcccttctgattatggagatggaagtggctctggg
aaaagatcaaagcactctctgcagtcgaaggcttttaaagtagagataagttatgttgca
aaaatacccttgaagtccatctctcttgcccttcaaggcgccgaagcagaaaatgtgcaa
gatggtctgagggtcctggatgtcatattgagacagaaagcagctaataaaggctgcctt
ttagttcggcaatcgttctttcatgatgacacacggacgttcagtgatgttggaggaggt
gtagctgccgtgaaagggttctattctagctttcgtcctactcatggtggtttatctcta
aatatggatgtatcctcaacaatgatcttgaaaccgggacctgttgtggatttcctactt
gctaaccagaatttgaaggatcgtcgcaatattgactgggacaaagccaagaggatgctc
aagaatctgagggttaaggccagacataacaacagggagttcaaaattataggtttgagt
gagaaaccatgcaatcagcagtttttttcattgaaagtgaaaaatggtggtaatgctaga
gatgatggtgagattttggagatcactgtttttgactactttgtgaaacaccgtggtcaa
gaactaacattttcagcatacatgccatgccttgatgttggaaaaccaaaacgaccaaac
tatttgcctttggagctatgttctctagtctctcttcaaagatacaagaaggcgttgtca
ggaatgcagagagcatccttagttgaacaatcaaggcagaaacctccagagagaattcga
gttgtcactgatgctgtgagaaactatcagtatgacgatgatccactcctaatttcttgc
ggcatttcaattgaaaagcagcttactcaagttgatggacgggtccttgacgtgccaaag
ttaaaggttggaaatggtgaagatttctttccccgcaatggacggtggaactttaataac
aagaaagttttgaatccctgccggattgagtgttggtcccttgttaatttctctgctcgt
tgtgatactagtcatctttctcgggagcttatcaactgtggaaggaacaagggcattcat
attgaacgtccatatacaataattgaggaagatccacaatgtagcagagctagccctttc
atacgcgtagaaaggatgtttgaacagattatggctaaactacctggtcctcctgagttt
ctgctttgcatcttaccagaacggaaaaactctgccatatatggaccatggaagaaaaaa
tgtttgactaacttgggcattgttacccaatgcacgtgtccttccaagatcaatgaccaa
tacctgactaacttacttctcaagatcaattccaagctaggggggaccaattctctgtta
gcccttgaacattcacgtagtttgccactcattaatgataagccaactttgattattgga
atggatgtttcacacggttctcctggtcaatcagatattccatccatagctgctgttgtt
ggatcccgtagttggccactgatatccagatatagagcagcagtgcgaactcaatcacca
aaggtggagatgattgaatctttatataagccacttgaaaatggggaagatgacggcatt
ataagggaactgctcttggatttctatcaaaccagtaacaagcggaaaccaagtcagatc
attgttttcagggatggtgtaagtgagtcacaattttctcaggtgctgaacatcgaactg
gatcaaatagtcaaggcttaccagcatcttggtgaggttgacgttccaaaattcactgtt
gtagtggctcagaagagacaccatacacagctatttcaagcttcggctcctgaaaacgtt
ccccctggtaccgttgtggacactaaagttgtacatccaagaaattatgatttctatttg
tgtgctcaagcagggatgattggaacttctcggccagcccattatcatgtcttacttaat
gagattggtttctctcctgatgatctgcaaaatcttgtccattcactgtcatatgtatac
caaaggagtactactgccgtttccatagttgcaccaatatgttatgcacatcttgcagcc
caacaaatagggcagttcttgaagtttgaagattcatctgaaacttcgtctggacagaaa
agtatgtcaacggcggtaccccaactgcccaggctgcacagtaatgttgctggatccatg
ttcttttgctga
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